DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11262 and ybiR

DIOPT Version :10

Sequence 1:NP_648617.2 Gene:CG11262 / 39471 FlyBaseID:FBgn0036329 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_415339.1 Gene:ybiR / 945438 ECOCYCID:G6421 Length:372 Species:Escherichia coli


Alignment Length:478 Identity:107/478 - (22%)
Similarity:182/478 - (38%) Gaps:139/478 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 DRTFAALMMATTGIAILTALGNRPTLETIISW---IDFETLILLLGMMILVAIMSETGVFDWMA- 293
            ||.|..|::...|::.......:       ||   ||:.|:|.|.|:|:|...:..:|.||.:. 
E. coli    12 DRFFQLLILVGIGLSFFVPFAPK-------SWPAAIDWHTIITLSGLMLLTKGVELSGYFDVLGR 69

  Fly   294 VLAYRISKGNPWPMLLLLSSITAIMSCMLDNVTMLLLMAPIAI---RLCEAMAVQTPLVLIVVVM 355
            .:..|.:......|.::|::  |::|..|.|...|.::.|:.|   ||||   :....::|...:
E. coli    70 KMVRRFATERRLAMFMVLAA--ALLSTFLTNDVALFIVVPLTITLKRLCE---IPVNRLIIFEAL 129

  Fly   356 YSNIGGTLTPVGDPPNVIIATNSEVISAGVDFLDFTIHMLP--GVLLAAV--------AGYAVMY 410
            ..|.|..|||:|:|.|::|...|     |:.|..|...|.|  |.::..:        .|.|:.|
E. coli   130 AVNAGSLLTPIGNPQNILIWGRS-----GLSFAGFIAQMAPLAGAMMLTLLLLCWCCFPGKAMQY 189

  Fly   411 VTMRKSLFKLEEQQLELAAERENSRRRSSADITARAEEMRIRQPTGRQLLKPAENYFQTLAHLEA 475
            .|                                     .::.|.    .||.            
E. coli   190 HT-------------------------------------GVQTPE----WKPR------------ 201

  Fly   476 HHRIRDKTLLIKCLFTLCFVIIFFLLHSLPFMHGATLGWVAILAAFLLLILAKMNDIEAILDQVE 540
                         |...|..:....|.:|.|.. ...|.|.:.|.|.||       ...::..|:
E. coli   202 -------------LVWSCLGLYIVFLTALEFKQ-ELWGLVIVAAGFALL-------ARRVVLSVD 245

  Fly   541 WSALLFLAALFVLTEAVDKLGFIRWLCDLTVKVIMSVEERYQTTVAILIIIWMSAI-LAAFVGNV 604
            |:.||...|:|:....:.:|..::       .|:.:|....:..      :|::|| |:..:.||
E. coli   246 WTLLLVFMAMFIDVHLLTQLPALQ-------GVLGNVSHLSEPG------LWLTAIGLSQVISNV 297

  Fly   605 PVTTMLLRLNIELHRNDAISVPLTPLIWALSYGACFGGNGTLIGASANVVAAAIAQQYGYKISFV 669
            |.|.:||.          ...|...|:||::    .||.|.|.|:.||::|..:|..   :..:.
E. coli   298 PSTILLLN----------YVPPSLLLVWAVN----VGGFGLLPGSLANLIALRMAND---RRIWW 345

  Fly   670 QFFIYGFPMMLTSIFLATVYLLI 692
            :|.:|..||:|.:..:..|.|:|
E. coli   346 RFHLYSIPMLLWAALVGYVLLVI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11262NP_648617.2 P_permease 220..691 CDD:238536 105/475 (22%)
ybiRNP_415339.1 YbiR_permease 8..366 CDD:238537 105/474 (22%)

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