DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11262 and NHD1

DIOPT Version :10

Sequence 1:NP_648617.2 Gene:CG11262 / 39471 FlyBaseID:FBgn0036329 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_566638.1 Gene:NHD1 / 821483 AraportID:AT3G19490 Length:576 Species:Arabidopsis thaliana


Alignment Length:635 Identity:136/635 - (21%)
Similarity:245/635 - (38%) Gaps:131/635 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SVVTVLPNETVLRRLSVPHDATQITLKGPIDLQLQKHESVIMETPHVGVRVEWRDSELKTKFWSS 153
            |:.|.||......::|....:|:::..|    .|.:.|..|..:.......|..|.:|.......
plant    29 SISTRLPQNVSFSKVSGVTGSTRLSKHG----VLVRAEDKIRSSSSPSSLDEPIDEDLMDSSGLC 89

  Fly   154 DMWIVYLAEQSQAFTKTS---KTVQISEVSNAQAVISLESRSEEPVALLMVVSV-YPLVTENGVL 214
            |. :..:.|.|.::.:.:   ||    ::..|.|:::        .||....:: :..|..|..:
plant    90 DP-LCSVDEPSSSYFEANYQPKT----DIIKALAILA--------AALTGTAAINHSWVAANQDV 141

  Fly   215 YAALLL-IGFYILIVFELTDRTFAALMMATTGIAILTALG-------NRPTLETIISWIDF---- 267
            ..|||. || |..|:||      .:|....:||.:|.|:.       ..|:.|  |:.:|.    
plant   142 AMALLFGIG-YAGIIFE------ESLAFNKSGIGLLMAVSLWVVRSIGAPSTE--IAVLDLQHAT 197

  Fly   268 ----ETLILLLGMMILVAIMSETGVFDWMAVLAYRISKGNPWPMLLLLSSITAIMSCMLDNVTML 328
                |.:..|||.|.:|.|:.....|   .::...|:...|..:|.::..:|..:|.:|||:|..
plant   198 AEVSEIVFFLLGAMTIVEIVDAHQGF---KLVTDNITTRKPKTLLWVVGFVTFFLSSILDNLTST 259

  Fly   329 LLMAPIAIRLCEAMAVQTPLVLIVVVMYSNIGGTLTPVGDPPNVIIATNSEVISAGVDFLDFTIH 393
            ::|..: ||.....:....|:..|||:.:|.||..||:||....::..:.::         .|:.
plant   260 IVMVSL-IRKLVPQSEYRKLLGGVVVIAANAGGAWTPIGDVTTTMLWIHGQI---------STLP 314

  Fly   394 MLPGVLLAAVAGYAVMYVTMRKSLFKLEEQQLELAAERENSRRRSSADITARAEEMRIRQPTGRQ 458
            .:..:.|.:|...||....|            .|.:| .|.:.:...|:.| :|:|   .|.|:.
plant   315 TMKDLFLPSVVSLAVPLALM------------SLTSE-VNGKEQDPKDVLA-SEKM---APRGKL 362

  Fly   459 LLKPAENYFQTLAHLEAHHRIRDKTLLIKCLFTLCFVIIFFLLHSLPFMHGATLG----WVAILA 519
            :....                         |..|.||.:|..|..||...|..||    |:...|
plant   363 VFGVG-------------------------LGALVFVPVFKALTGLPPYMGILLGLGVLWILTDA 402

  Fly   520 AFLLLILAKMNDIEAILDQVEWSALLFLAALFVLTEAVDKLGFIRWLCDLTVKVIMSVEERYQTT 584
            ........:...:...|.:::....||...:.:...:::..|.:|.:.:.....|.:||      
plant   403 IHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDANIPNVE------ 461

  Fly   585 VAILIIIWMSAILAAFVGNVPVTTMLLRLNIELHRNDAISVPLTPLIWAL-SYGACFGGNGTLIG 648
                :|.....:::|.:.|||:....:.:      .|..|.|.....|.| ::.|..||:..:||
plant   462 ----LIASAIGVVSAIIDNVPLVAATMGM------YDLTSFPQDSEFWQLIAFCAGTGGSMLVIG 516

  Fly   649 ASANVVAAAIAQQYGYKISFVQFF--IYGFPMMLTSIFLATVYLLIAHSL 696
            ::|.|....:.     |:.|..:|  :.||.....:..:| .||.: |:|
plant   517 SAAGVAFMGME-----KVDFFWYFRKVSGFAFAGYAAGIA-AYLAV-HNL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11262NP_648617.2 P_permease 220..691 CDD:238536 106/493 (22%)
NHD1NP_566638.1 PLN00137 136..559 CDD:215071 112/509 (22%)

Return to query results.
Submit another query.