DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11262 and Indy

DIOPT Version :10

Sequence 1:NP_648617.2 Gene:CG11262 / 39471 FlyBaseID:FBgn0036329 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster


Alignment Length:610 Identity:103/610 - (16%)
Similarity:210/610 - (34%) Gaps:149/610 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 TKTSKTVQISEVSNAQAVISLESRSEEPVALL---------MVVSVYPL------VTENGVLYAA 217
            |:|:|.:......:.:..|.:..:.:.||...         :||.:.||      :...|..:..
  Fly     3 TETTKMIYTPPPLDIKMEIEIGEQPQPPVKCSNFFANHWKGLVVFLVPLLCLPVMLLNEGAEFRC 67

  Fly   218 LLLIGFYILIVFELTDR--TFAALMMATTGIAILTALGNRPTLETIISWIDFETLILLLGMMILV 280
            :.|:  .::.:|.:|:.  .:...|:......|:..:.:..|......    :||::.:|.:::.
  Fly    68 MYLL--LVMAIFWVTEALPLYVTSMIPIVAFPIMGIMSSDQTCRLYFK----DTLVMFMGGIMVA 126

  Fly   281 AIMSETGVFDWMAVLAYRISKGNPWPMLLLLSSITAIMSCMLDNVTMLLLMAPIAIRLCEAMAVQ 345
            ..:....:...:|:...:|...:|..:...|..:|..:|..:.|.....:|.||...:.|.:..|
  Fly   127 LAVEYCNLHKRLALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEELQAQ 191

  Fly   346 TPLVLIVVVMYSNIGGTLTPVGDPP-----------------------NVIIATNSEVISAGV-- 385
            ....:.....|..:||......|.|                       ..||.|.:.:...|:  
  Fly   192 GVCKINHEPQYQIVGGNKKNNEDEPPYPTKITLCYYLGIAYASSLGGCGTIIGTATNLTFKGIYE 256

  Fly   386 ----------DFLDFTIHMLPGVLLAAVAGYAVM-YVTMRKSLFKLEEQQLELAAERENSRRRSS 439
                      ||..|..:.:|.:|:     |.:: :|.::.....|...:.:.|  :|..|.|..
  Fly   257 ARFKNSTEQMDFPTFMFYSVPSMLV-----YTLLTFVFLQWHFMGLWRPKSKEA--QEVQRGREG 314

  Fly   440 ADITARAEEMRIRQPTGRQLLKPAENYFQTLAHLEAHHRIRDKTLLIKCLFTLCFVIIFFLLHSL 504
            ||:..:..:.|                ::.|..:..|.        |:.:....|:::.:.... 
  Fly   315 ADVAKKVIDQR----------------YKDLGPMSIHE--------IQVMILFIFMVVMYFTRK- 354

  Fly   505 PFMHGATLGWVAIL------------------------AAFLLLILAKMNDI-----------EA 534
               .|..|||..:|                        .|||.....:...:           :.
  Fly   355 ---PGIFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKF 416

  Fly   535 ILDQVEWSALLFLAALFVLTEAVDKLGFIRWLCD--LTVKVIMSVEERYQTTVAILIIIWMSAIL 597
            |..:|.|..:..|...|.|.|...:.|..:.:.:  :.:||:       ..:|.:|::|.::..|
  Fly   417 IQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGLKVL-------PNSVLLLVVILVAVFL 474

  Fly   598 AAFVGNVPVTTMLLRLNIELHRNDAISVPLTPLIWALSYG-ACFGGNGTLIGASANVVAAAIAQQ 661
            .||..||.:..:::.:..|:    ::::.:.||...|..| ||.......:....|.:.|..|  
  Fly   475 TAFSSNVAIANIIIPVLAEM----SLAIEIHPLYLILPAGLACSMAFHLPVSTPPNALVAGYA-- 533

  Fly   662 YGYKISFVQFFIYGF-PMMLTSIFL 685
               .|......|.|. |.::|.|.|
  Fly   534 ---NIRTKDMAIAGIGPTIITIITL 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11262NP_648617.2 P_permease 220..691 CDD:238536 92/543 (17%)
IndyNP_730363.2 CitT 120..545 CDD:440239 79/475 (17%)

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