DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11262 and Oca2

DIOPT Version :9

Sequence 1:NP_648617.2 Gene:CG11262 / 39471 FlyBaseID:FBgn0036329 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001258422.1 Gene:Oca2 / 100365773 RGDID:2318412 Length:842 Species:Rattus norvegicus


Alignment Length:685 Identity:261/685 - (38%)
Similarity:384/685 - (56%) Gaps:68/685 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GRFIFKIIRIGALLLIWAFFTYILVRNATTPD---LTSVVTVLPNETVLRRLSVPHDATQITLK- 115
            |.|:|.::    ..::::.:          ||   |..::.|.|.|.....||...|:..:.|. 
  Rat   187 GLFVFVVL----CSILFSLY----------PDQGKLWQLLAVSPLENYSVTLSGRADSIILQLDL 237

  Fly   116 -------GPIDLQLQKHESVIM-ETPHVGVRVEWRDSELKTKFWSSDMWIVYLAEQSQAFTKTSK 172
                   ||.....::|..|:: :|..||.|  ||..:..|..|:     |.|..:|: ....|:
  Rat   238 AGALMPGGPSGSGKEEHVMVVVTQTDAVGNR--WRRPQQVTHNWT-----VPLNPRSE-HVVVSR 294

  Fly   173 TVQISEVSNAQAVISLESRSEEP--VALLMVVSVYPLVTENGVLYAALLLIGFYILIVFELTDRT 235
            |.:|  ||.....||:::..::.  |.||:.........|..|..|..:|.|.|.||:||:..||
  Rat   295 TFEI--VSREAVSISIQASLQQTRLVPLLLAHQFLGASVEAQVASAVAILTGVYTLIIFEIVHRT 357

  Fly   236 FAALMMATTGIAILTALGNRPTLETIISWIDFETLILLLGMMILVAIMSETGVFDWMAVLAYRIS 300
            .||::.|...:|.|..:|:||:|..::.|||||||.||.||||||||.||||.||:.||.||::|
  Rat   358 LAAMLGALAALAALAVVGDRPSLTHVVEWIDFETLALLFGMMILVAIFSETGFFDYCAVKAYQLS 422

  Fly   301 KGNPWPMLLLLSSITAIMSCMLDNVTMLLLMAPIAIRLCEAMAVQTPLVLIVVVMYSNIGGTLTP 365
            :|..|.|:::|..:.||:|..|||||.:||..|:.|||||.:.:....|||..|:::||||..|.
  Rat   423 RGRVWAMIIMLCLMAAILSAFLDNVTTMLLFTPVTIRLCEVLNLDPRQVLIAEVIFTNIGGAATA 487

  Fly   366 VGDPPNVIIATNSEVISAGVDFLDFTIHMLPGVLLAAVAGYAVM-YVTMRKSLFKLEEQQL---- 425
            :||||||||.:|.|:...|:||..||.||..|:.|..:..:.:: .:...|.|:..|..::    
  Rat   488 IGDPPNVIIVSNQELRKMGLDFAGFTAHMFLGICLVLLVSFPLLRLLYWNKKLYNKEPSEIVELK 552

  Fly   426 -ELAAERENSRRRSSADITARAEEMRIR------------------QPTGRQLLKPAENYFQTLA 471
             |:...|..::|.|.|.    .||..:|                  ....||:.:..:|:...:.
  Rat   553 HEIHVWRLTAQRISPAS----REETAVRGLLLEKVLALEHLLAQRLHTFHRQISQEDKNWETNIQ 613

  Fly   472 HLEAHHRIRDKTLLIKCLFTLCFVIIFFLLHS-LPFMHGATLGWVAILAAFLLLILAKMNDIEAI 535
            .|:..|||.|::||:|||..|.|||..|.|:| :|.:| ..|||:|||.|..|||||.::|.|.|
  Rat   614 ELQRKHRISDRSLLVKCLTVLGFVISMFFLNSFVPGIH-LDLGWIAILGAIWLLILADIHDFEII 677

  Fly   536 LDQVEWSALLFLAALFVLTEAVDKLGFIRWLCDLTVKVIMSVEERYQTTVAILIIIWMSAILAAF 600
            |.:|||:.|||.||||||.||:..|..:.::.:.|..:|..|.|..:...||::|:|:||:.::.
  Rat   678 LHRVEWATLLFFAALFVLMEALTHLHLVEYVGEQTALLIKMVPEDQRFAAAIVLIVWVSALASSL 742

  Fly   601 VGNVPVTTMLLRLNIELHRNDAISVPLTPLIWALSYGACFGGNGTLIGASANVVAAAIAQQYGYK 665
            :.|:|.|..::.:.:.|.::..||:|..||::||:.|||.||||||||||||||.|.||:|:||.
  Rat   743 IDNIPFTATMIPVLLNLSQDPEISLPALPLMYALALGACLGGNGTLIGASANVVCAGIAEQHGYG 807

  Fly   666 ISFVQFFIYGFPMMLTSIFLATVYLLIAHSLFAWH 700
            .||::||..||||||.|..:...||||||.:..|:
  Rat   808 FSFMEFFRLGFPMMLMSCTIGMCYLLIAHVVVGWN 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11262NP_648617.2 ArsB 216..692 CDD:223983 216/500 (43%)
P_permease 220..691 CDD:238536 214/495 (43%)
Oca2NP_001258422.1 ArsB 335..834 CDD:223983 217/503 (43%)
P_permease 342..833 CDD:238536 214/495 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340614
Domainoid 1 1.000 94 1.000 Domainoid score I7298
eggNOG 1 0.900 - - E1_COG1055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D150165at33208
OrthoFinder 1 1.000 - - FOG0001813
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43568
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.810

Return to query results.
Submit another query.