DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and MDH2

DIOPT Version :9

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_014515.2 Gene:MDH2 / 853994 SGDID:S000005486 Length:377 Species:Saccharomyces cerevisiae


Alignment Length:379 Identity:144/379 - (37%)
Similarity:206/379 - (54%) Gaps:68/379 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NLPPKVQQLGYINRGLKVAVVGSVGGIGQPLSLLLKHNPQIST-----------LSLYDIKN--T 64
            ::.|.::|     ..||:|::|:.|||||.||||||...|...           |:|||:..  .
Yeast     4 SVTPSIEQ-----DSLKIAILGAAGGIGQSLSLLLKAQLQYQLKESNRSVTHIHLALYDVNQEAI 63

  Fly    65 TGVGVDLSHINTRASVCPFEGKNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAF 129
            .||..|||||:|..||.......|::..:..|.|||||||:||||||.|:||.:|||.:..::..
Yeast    64 NGVTADLSHIDTPISVSSHSPAGGIENCLHNASIVVIPAGVPRKPGMTRDDLFNVNAGIISQLGD 128

  Fly   130 AASEVC--PGAMLAFITNPINVIVPI-VATILK----AKGTYDPNRLFGVTTLDVVRAQTFVADI 187
            :.:|.|  ....:..|:||:|.:||: |:.|||    ::.:....|:.|||.||:|||.||:.:|
Yeast   129 SIAECCDLSKVFVLVISNPVNSLVPVMVSNILKNHPQSRNSGIERRIMGVTKLDIVRASTFLREI 193

  Fly   188 LNVD---PQKVN----IPVIGGHTGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKD 245
             |::   ..:||    :||||||:|.||:|:.||.:...:..:.:.:.||.|:|..|.|||.||:
Yeast   194 -NIESGLTPRVNSMPDVPVIGGHSGETIIPLFSQSNFLSRLNEDQLKYLIHRVQYGGDEVVKAKN 257

  Fly   246 GLGSATLSMAFA----ATQFVSSLIKGIKGSKDECIVECAYVE------------SD-----VTE 289
            |.||||||||.|    ..||||.|:..|     |.|....||.            :|     |..
Yeast   258 GKGSATLSMAHAGYKCVVQFVSLLLGNI-----EQIHGTYYVPLKDANNFPIAPGADQLLPLVDG 317

  Fly   290 AQFFATPLILGPQGVK--ENTGLPDLDDEERKALNGMLPI----LKESIAKGIK 337
            |.:||.||.:..:||.  :...:..::|.||   |.||||    ||::|.||::
Yeast   318 ADYFAIPLTITTKGVSYVDYDIVNRMNDMER---NQMLPICVSQLKKNIDKGLE 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 142/362 (39%)
MDH_euk_gproteo 29..345 CDD:130833 141/363 (39%)
MDH2NP_014515.2 MDH_euk_gproteo 15..372 CDD:130833 141/363 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344502
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S410
OMA 1 1.010 - - QHG56560
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.760

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