DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and MDH3

DIOPT Version :9

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_010205.1 Gene:MDH3 / 851481 SGDID:S000002236 Length:343 Species:Saccharomyces cerevisiae


Alignment Length:337 Identity:127/337 - (37%)
Similarity:192/337 - (56%) Gaps:34/337 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LKVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDIKNTTGVGVDLSHINTRASVCPFEGKNGLKKA 92
            :|||::|:.||:|||||||||.:|.:|.|:||||:...|:|.|||||||.:| |....|:.::..
Yeast     2 VKVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSS-CVGYDKDSIENT 65

  Fly    93 MDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNPINVIVPIVATI 157
            :..|.:|:||||:|||||:.|:||..:||.:...:..|..:..|.|.:..|:||:|.:|||....
Yeast    66 LSNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKSLVTAVGKFAPNARILVISNPVNSLVPIAVET 130

  Fly   158 LKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKV-----------NIPVIGGHTGRTILPI 211
            ||..|.:.|..:.|||.||:|||:||:.|.|.:...|:           .:.|||||:|.||:||
Yeast   131 LKKMGKFKPGNVMGVTNLDLVRAETFLVDYLMLKNPKIGQEQDKTTMHRKVTVIGGHSGETIIPI 195

  Fly   212 LSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDGLGSATLSMAFAATQFVSSLIKGIKGSKDEC 276
            ::.....|: .||:.|..|.|:|..|.|:|.||.|.||||||||||..:|...:::.....|.|.
Yeast   196 ITDKSLVFQ-LDKQYEHFIHRVQFGGDEIVKAKQGAGSATLSMAFAGAKFAEEVLRSFHNEKPET 259

  Fly   277 IVECAYV----------------ESDVTEAQFFATPLILGPQGVK--ENTGLPDLDDEERKALNG 323
            ....|:|                ::.:   ::|:.|::|....|.  :.:.|..|...|.:.:|.
Yeast   260 ESLSAFVYLPGLKNGKKAQQLVGDNSI---EYFSLPIVLRNGSVVSIDTSVLEKLSPREEQLVNT 321

  Fly   324 MLPILKESIAKG 335
            .:..|:::|.||
Yeast   322 AVKELRKNIEKG 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 127/337 (38%)
MDH_euk_gproteo 29..345 CDD:130833 127/336 (38%)
MDH3NP_010205.1 MDH_euk_gproteo 3..339 CDD:130833 127/336 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56560
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1106
TreeFam 1 0.960 - -
65.880

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