DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and c-NAD-MDH3

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_200483.2 Gene:c-NAD-MDH3 / 835773 AraportID:AT5G56720 Length:372 Species:Arabidopsis thaliana


Alignment Length:273 Identity:70/273 - (25%)
Similarity:112/273 - (41%) Gaps:40/273 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LKVAVVGSVGGIGQPLS-------LLLKHNPQISTLSLYDIKNTTGVGVDLSHINTRASVCP-FE 84
            ::|.:.|:.|.||..::       :|....|.|  |.|.||:..:. .::...:..:.|..| .:
plant    45 IRVLITGAAGNIGYAIAPMIARGIMLGPDQPMI--LHLLDIEPASS-SLEAVKMELQDSAFPLLK 106

  Fly    85 G---KNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFA----ASEVCPGAMLAF 142
            |   ...:.:|....:||::..|.||..||:|:|::..|..:....|.|    ||:.|   .:..
plant   107 GVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQASALERYASDDC---KVLV 168

  Fly   143 ITNPINVIVPIVATILKAKGTYDP-NRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVIGGHTGR 206
            :.||.|.    .|.|||......| ..:..:|.||..||...:||.|:|....|...::.|:...
plant   169 VANPANT----NALILKEFAPSIPEENITCLTRLDHNRALAQLADKLSVPVSSVKNVIVWGNHSS 229

  Fly   207 TILPILSQC-------DPPFKG--TDKE--REALIQRIQNAGTEVVNAKDGLGSATLSMAFAATQ 260
            |..|..:..       |.|.|.  ||..  :...|..:|..|..|:.|:.  .|:..|.|.||..
plant   230 TQYPDTNHATVSTKTGDRPLKELVTDHNWLKNEFIVEVQQRGAAVLRARK--QSSAFSAAGAACD 292

  Fly   261 FVSSLIKGI-KGS 272
            .:.....|. ||:
plant   293 HIRDWFLGTPKGT 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 70/273 (26%)
c-NAD-MDH3NP_200483.2 PLN00135 63..371 CDD:177744 65/255 (25%)

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