DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and mdh2

DIOPT Version :9

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001011412.1 Gene:mdh2 / 496892 XenbaseID:XB-GENE-971714 Length:338 Species:Xenopus tropicalis


Alignment Length:318 Identity:163/318 - (51%)
Similarity:222/318 - (69%) Gaps:10/318 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RGL--------KVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDIKNTTGVGVDLSHINTRASVCP 82
            |||        :|||:|:.||||||||||||::|.||.|:||||.:|.||..|||||.|||.|..
 Frog    15 RGLSTTAQANARVAVLGASGGIGQPLSLLLKNSPLISNLTLYDIAHTPGVAADLSHIETRAKVTG 79

  Fly    83 FEGKNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNPI 147
            :.|...|.:::..||:||||||:||||||.|:||...|||:...:..|.::.||.||:..|:||:
 Frog    80 YLGAEQLPESLKGADVVVIPAGVPRKPGMTRDDLFTTNASIVATLTEACAKHCPEAMICIISNPV 144

  Fly   148 NVIVPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVIGGHTGRTILPIL 212
            |..:||.:.:.|..|.|:||.:|||||||:|||.||||::..:||.:||:||:|||.|:||:|::
 Frog   145 NSTIPITSEVFKKHGVYNPNHIFGVTTLDIVRANTFVAELKGLDPARVNVPVVGGHAGKTIIPLI 209

  Fly   213 SQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDGLGSATLSMAFAATQFVSSLIKGIKGSKDECI 277
            ||..|..:....:.||||.|||:||||||.||.|.||||||||:|..:||.||:..:.|.  |.:
 Frog   210 SQSTPKVEFPQDQLEALIPRIQDAGTEVVKAKAGAGSATLSMAYAGARFVFSLLDAMNGK--EGV 272

  Fly   278 VECAYVESDVTEAQFFATPLILGPQGVKENTGLPDLDDEERKALNGMLPILKESIAKG 335
            :||::|.|:.||:.:|:|||:||..|:::|.||..|...|.|.::..:..||.||.||
 Frog   273 IECSFVRSEETESPYFSTPLLLGKNGIEKNLGLGKLTAFEEKLVSEAMGELKASIKKG 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 161/316 (51%)
MDH_euk_gproteo 29..345 CDD:130833 160/307 (52%)
mdh2NP_001011412.1 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 160/307 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.110

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