DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and Ldh

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_476581.1 Gene:Ldh / 45880 FlyBaseID:FBgn0001258 Length:332 Species:Drosophila melanogaster


Alignment Length:333 Identity:77/333 - (23%)
Similarity:133/333 - (39%) Gaps:75/333 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSHVGNLPPKVQQLGYINRGLKVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDI--KNTTGVGV 69
            ||:.|..:.|        :.|.||.:|| :|.:|...:..:........:.|.|:  ....|..:
  Fly     8 LLAQVAEVLP--------SSGHKVTIVG-IGQVGMASAFSILAQNVSKEVCLIDVCADKLQGELM 63

  Fly    70 DLSHINTRASVCPFEGKNGLKK----------AMDKADIVVIPAGLPRKPGMKREDLVDVNASVA 124
            ||.|           |.|.||.          |...:.:.::.||:.:|.|..|..||..|..:.
  Fly    64 DLQH-----------GSNFLKNPQITASTDFAASANSRLCIVTAGVRQKEGESRLSLVQRNTDIL 117

  Fly   125 CEVAFAASEVCPGAMLAFITNPINVIVPIVATILKAKGTYDPNRLFGV-TTLDVVRAQTFVADIL 188
            ..:.....|..|..:|..::||::::..:.   .|..| ...||:.|. |.||..|.:..::..|
  Fly   118 KNIIPKLVEYSPDTILLMVSNPVDIMTYVA---WKLSG-LPKNRVIGSGTNLDSSRFRFLMSQRL 178

  Fly   189 NVDPQKVNIPVIGGHTGRTILPILSQCD---------PPFKGTDKERE---ALIQRIQNAGTEVV 241
            .|.|...:..:||.| |.:.:|:.|..:         .|..||.::.|   .|.:::.::..||:
  Fly   179 GVAPTSCHGWIIGEH-GDSSVPVWSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVI 242

  Fly   242 NAKD------GLGSATLSMAF----AATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQFFATP 296
            ..|.      ||.:|:|:.|.    ::...||:.:.|..|           ::.||    |.:.|
  Fly   243 KLKGYTSWAIGLSTASLASAILRNTSSVAAVSTSVLGEHG-----------IDKDV----FLSLP 292

  Fly   297 LILGPQGV 304
            .:|...||
  Fly   293 CVLNANGV 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 72/312 (23%)
LdhNP_476581.1 LDH_1 18..329 CDD:133429 73/315 (23%)

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