DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and mdh1

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001303830.1 Gene:mdh1 / 448318 XenbaseID:XB-GENE-484872 Length:353 Species:Xenopus tropicalis


Alignment Length:339 Identity:81/339 - (23%)
Similarity:133/339 - (39%) Gaps:73/339 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LKVAVVGSVG----------------GIGQPLSL-LLKHNPQISTLSLYDIKNTTGVGVDLSHIN 75
            :||.|.|:.|                |..|||.| ||...|.::.|.        ||.::|    
 Frog     5 VKVLVTGAAGQIAYSLLYGIAKGDVFGKDQPLILVLLDITPMMTVLE--------GVVMEL---- 57

  Fly    76 TRASVCPFEGKNGLKK--AMDK-------ADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAA 131
             :....|.     ||:  |.||       .|:.::...:||:.||:|:||:..|..:......|.
 Frog    58 -QDCALPL-----LKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAAL 116

  Fly   132 SEVCPGAMLAFIT-NPINVIVPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKV 195
            ::....::...:. ||.|.   ...|.:|:..:........:|.||..||:..:|..|||....|
 Frog   117 NKYSKKSVKVIVVGNPANT---NCLTAMKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDV 178

  Fly   196 NIPVIGGHTGRTILPILSQCDPPFKGTD-------KEREAL----IQRIQNAGTEVVNAKDGLGS 249
            ...:|.|:...|..|..|......:|.|       |..:.|    |..:|..|..|:.|:     
 Frog   179 KNVIIWGNHSSTQYPDASHATVNLQGKDVGAFEAVKNDDWLKGEFITTVQQRGAAVIKAR----- 238

  Fly   250 ATLSMAFAATQFVSSLIKGI-KGSKDECIVECAYVESD-----VTEAQFFATPLILGPQGVKENT 308
             .||.|.:|.:.:...::.| .|:.|...|....: ||     :.|...::.||.:..:..|...
 Frog   239 -KLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVI-SDGNSYGIPEDLMYSFPLTIKNKTWKIVE 301

  Fly   309 GLPDLDDEERKALN 322
            ||| ::|..|:.::
 Frog   302 GLP-INDFSREKMD 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 81/339 (24%)
mdh1NP_001303830.1 MDH_cytoplasmic_cytosolic 3..328 CDD:133421 81/339 (24%)
PTS1 351..353
Blue background indicates that the domain is not in the aligned region.

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