DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and LDHC

DIOPT Version :9

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_002292.1 Gene:LDHC / 3948 HGNCID:6544 Length:332 Species:Homo sapiens


Alignment Length:341 Identity:81/341 - (23%)
Similarity:144/341 - (42%) Gaps:60/341 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NRGLKVAVVGSVGGIGQ--PLSLLLKHNPQISTLSLYDI--KNTTGVGVDLSHINTRASVCPF-E 84
            |...|:.:||: |.:|.  .:|:|||  .....|:|.|:  ....|..:||.|.:...|.... .
Human    18 NSQCKITIVGT-GAVGMACAISILLK--DLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITS 79

  Fly    85 GKNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNPINV 149
            ||:....|..:  ||::.||..::.|..|..||..|.::...:..|.....|...:..::||:::
Human    80 GKDYSVSANSR--IVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVDI 142

  Fly   150 IVPIVATILKAKGTYDPNRLFGV-TTLDVVRAQTFVADILNVDPQKVNIPVIGGHTGRTILPI-- 211
            :..||..|.....|    |:.|. ..||..|.:..:.:.|.|.|...:..:||.| |.:.:|:  
Human   143 LTYIVWKISGLPVT----RVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEH-GDSSVPLWS 202

  Fly   212 --------LSQCDPPFKGTDKERE---ALIQRIQNAGTEVVNAKD----GLGSATLSMA------ 255
                    |...||.. |||.::|   .:.:::..:..|::..|.    .:|.:.:.:.      
Human   203 GVNVAGVALKTLDPKL-GTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKN 266

  Fly   256 FAATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQGVKENTGLPDLDDEE--- 317
            ......||:::||:.|.|:|.               |.:.|.:||..||.:...: :|:.||   
Human   267 LRRVHPVSTMVKGLYGIKEEL---------------FLSIPCVLGRNGVSDVVKI-NLNSEEEAL 315

  Fly   318 -RKALNGMLPILKESI 332
             :|:...:..|.|:.|
Human   316 FKKSAETLWNIQKDLI 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 80/338 (24%)
MDH_euk_gproteo 29..345 CDD:130833 80/337 (24%)
LDHCNP_002292.1 LDH_1 18..329 CDD:133429 79/337 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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