DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10749 and ldhba

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571322.1 Gene:ldhba / 30497 ZFINID:ZDB-GENE-991026-6 Length:334 Species:Danio rerio


Alignment Length:363 Identity:87/363 - (23%)
Similarity:138/363 - (38%) Gaps:107/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KVAVVGSVGGIGQ--PLSLLLKHNPQISTLSLYDI--KNTTGVGVDLSHINTRASVCPFEGKNGL 89
            ||.:|| ||.:|.  .:|:||:.  ....|:|.|:  ....|..:||.|           |...|
Zfish    23 KVTIVG-VGQVGMACAVSVLLRE--LADELALVDVVEDRLKGEMLDLQH-----------GSLFL 73

  Fly    90 KKAMDKAD----------IVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFIT 144
            |.....||          |||:.||:.::.|..|.:||..|.::...:.....:..|..:|..::
Zfish    74 KTPKIVADKDYSVTANSRIVVVTAGVRQQEGESRLNLVQRNVNIFKHIIPQIVKYSPDCILVVVS 138

  Fly   145 NPINVIVPIVATILKAKGTYDPNRLFGV---------TTLDVVRAQTFVADILNVDPQKVNIPVI 200
            ||::|:            ||...:|.|:         ..||..|.:..:|:.|.:.....|..::
Zfish   139 NPVDVL------------TYVTWKLSGLPKHRVIGSGPNLDSARFRYIMAEKLGIHASSFNGYIL 191

  Fly   201 GGHTGRTILPI----------LSQCDPPFKGTDKERE---ALIQRIQNAGTEVVNAKD------G 246
            |.| |.|.:|:          |.:.:|.. ||||:.|   ...:.:.::..||:..|.      |
Zfish   192 GEH-GDTSVPVWSGANVAGVSLQKLNPDI-GTDKDAENWKEAHKMVVDSAYEVIKLKGYTNWAIG 254

  Fly   247 LGSA----TLSMAFAATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQGVKE- 306
            |..|    ||.........||:::||:.|               :.|..:.:.|.:|...||.. 
Zfish   255 LSVADLTETLVKNLNRVHPVSTMVKGMYG---------------INEEVYLSLPCVLNSSGVGSV 304

  Fly   307 -NTGLPDLDDEERKALNGMLPILKES------IAKGIK 337
             |..|.|          |.:..||.|      |.|.:|
Zfish   305 INMTLTD----------GEIGQLKSSADTLWGIQKDLK 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 86/361 (24%)
ldhbaNP_571322.1 LDH_1 19..330 CDD:133429 85/359 (24%)

Return to query results.
Submit another query.