DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and ldha

DIOPT Version :9

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571321.1 Gene:ldha / 30496 ZFINID:ZDB-GENE-991026-5 Length:333 Species:Danio rerio


Alignment Length:359 Identity:97/359 - (27%)
Similarity:148/359 - (41%) Gaps:91/359 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLSHVGNLPPKVQQLGYINRGLKVAVVGSVG--GIGQPLSLLLKHNPQISTLSLYDI--KNTTG 66
            :|::||.    |.|..|..|   ||.||| ||  |:...:|:|||  .....|:|.|:  ....|
Zfish     7 KLIAHVS----KEQPAGPTN---KVTVVG-VGMVGMAAAVSILLK--DLTDELALVDVMEDKLKG 61

  Fly    67 VGVDLSHINTRASVCPFEGKNGLKKAMDKAD----------IVVIPAGLPRKPGMKREDLVDVNA 121
            ..:||.|           |...||.....||          :||:.||..::.|..|.:||..|.
Zfish    62 EAMDLQH-----------GSLFLKTHKIVADKDYSVTANSKVVVVTAGARQQEGESRLNLVQRNV 115

  Fly   122 SVACEVAFAASEVCPGAMLAFITNPINVIVPIVATILKAKGTYDPNRLFGV-TTLDVVRAQTFVA 185
            ::...:.....:..|..:|..::||::::..:.   .|..| ...||:.|. |.||..|.:..:.
Zfish   116 NIFKFIIPNIIKYSPNCILLVVSNPVDILTYVA---WKLSG-LPRNRVIGSGTNLDSARFRYLMG 176

  Fly   186 DILNVDPQKVNIPVIGGHTGRTILPILS---------QCDPPFKGTDKERE---ALIQRIQNAGT 238
            :.|.:.|...:..|:|.| |.:.:|:.|         |...|..||||::|   ::.:.:.::..
Zfish   177 EKLGIHPSSCHGWVVGEH-GDSSVPVWSGVNVAGVSLQALNPDLGTDKDKEDWKSVHKMVVDSAY 240

  Fly   239 EVVNAKDGLGSATLSMAFA-----------ATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQF 292
            ||:..| |..|..:.|:.|           ....||:|:||:.|               |.|..|
Zfish   241 EVIKLK-GYTSWAIGMSVADLCESILKNMHKCHPVSTLVKGMHG---------------VNEEVF 289

  Fly   293 FATPLILGPQGVKENTGLPD-----LDDEERKAL 321
            .:.|.|||      |.||.|     |..||.|.|
Zfish   290 LSVPCILG------NNGLTDVVHMTLKPEEEKQL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 90/337 (27%)
MDH_euk_gproteo 29..345 CDD:130833 90/336 (27%)
ldhaNP_571321.1 LDH_1 19..330 CDD:133429 92/343 (27%)
L-LDH-NAD 39..325 CDD:273796 82/319 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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