DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and mdh1

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001342887.1 Gene:mdh1 / 2538766 PomBaseID:SPCC306.08C Length:341 Species:Schizosaccharomyces pombe


Alignment Length:315 Identity:148/315 - (46%)
Similarity:204/315 - (64%) Gaps:8/315 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NRGLKVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDIKNTTGVGVDLSHINTRASVCPF-EGKNG 88
            :|..||||:|:.||||||||:|||.|.::|.|:|:||:...||..|:.||||.::|..: ....|
pombe    26 SRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKG 90

  Fly    89 LKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNPINVIVPI 153
            |:||::.||:|:||||:||||||.|:||...|||:..::||||.|.||.|....:|||:|..|||
pombe    91 LEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEAKYLVVTNPVNSTVPI 155

  Fly   154 VATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVIGGHTGRTILPILSQCDPP 218
            ....|:..|.:.|..||||||||.|||..|.:.:.|...:.::|||:|||:|.||:|:|||....
pombe   156 FKKALERVGVHQPKHLFGVTTLDSVRASRFTSQVTNGKAELLHIPVVGGHSGATIVPLLSQGGVE 220

  Fly   219 FKGTDKEREALIQRIQNAGTEVVNAKDGLGSATLSMAFAATQFVSSLIKGIKGSKDECIVECAYV 283
            ..|  ::|:|||.|||..|.|||.||.|.||||||||:|..:..||:::.:.|  :..:.||.:|
pombe   221 LTG--EKRDALIHRIQFGGDEVVKAKAGAGSATLSMAYAGARMASSVLRALAG--ESGVEECTFV 281

  Fly   284 ESDVTEAQ---FFATPLILGPQGVKENTGLPDLDDEERKALNGMLPILKESIAKG 335
            ||.:.:.|   |||:.:.||..||.....:..::|.|...|...|..||:||.||
pombe   282 ESPLYKDQGIDFFASRVTLGKDGVDTIHPVGKINDYEESLLKVALGELKKSITKG 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 147/312 (47%)
mdh1NP_001342887.1 MDH_glyoxysomal_mitochondrial 29..340 CDD:133422 147/312 (47%)

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