DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and Ldhb

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001303262.1 Gene:Ldhb / 24534 RGDID:2997 Length:341 Species:Rattus norvegicus


Alignment Length:358 Identity:82/358 - (22%)
Similarity:142/358 - (39%) Gaps:87/358 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDI--KNTTGVGVDLSHINTRASVCPFEGKNGLKK 91
            |:.||| ||.:|...::.:........|:|.|:  ....|..:||.|           |...|:.
  Rat    23 KITVVG-VGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH-----------GSLFLQT 75

  Fly    92 AMDKAD----------IVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNP 146
            ....||          |||:.||:.::.|..|.:||..|.:|...:.....:..|...:..::||
  Rat    76 PKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCTIIVVSNP 140

  Fly   147 INVIVPIVATILKAKGTYDPNRLFGV---------TTLDVVRAQTFVADILNVDPQKVNIPVIGG 202
            ::::            ||...:|.|:         ..||..|.:..:|:.|.:.|...:..::|.
  Rat   141 VDIL------------TYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGE 193

  Fly   203 H--------TGRTILPILSQCDPPFKGTDKERE---ALIQRIQNAGTEVVNAKD------GLGSA 250
            |        :|..:..:..|...|..|||.:.|   .:.:.:.::..||:..|.      ||..|
  Rat   194 HGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVDSAYEVIKLKGYTNWAIGLSVA 258

  Fly   251 TL--SMAFAATQF--VSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQGVKENTGLP 311
            .|  ||....::.  ||:::||:.|           :|::|    |.:.|.||..:|:.......
  Rat   259 DLIESMLKNLSRIHPVSTMVKGMYG-----------IENEV----FLSLPCILNARGLTSVINQK 308

  Fly   312 DLDDEE---RKALNGMLPI---LKESIAKGIKL 338
            ..|||.   ||:.:.:..|   ||:....|.:|
  Rat   309 LKDDEVAQLRKSADTLWDIQKDLKDLXLPGARL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 81/355 (23%)
LdhbNP_001303262.1 LDH_1 20..330 CDD:133429 78/345 (23%)
PTS1 339..341 0/1 (0%)

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