DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and Ldhc

DIOPT Version :9

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001355290.1 Gene:Ldhc / 16833 MGIID:96764 Length:332 Species:Mus musculus


Alignment Length:353 Identity:87/353 - (24%)
Similarity:148/353 - (41%) Gaps:74/353 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VGNLPPKVQQLGYINRGLKVAVVGSVGGIGQ--PLSLLLKHNPQISTLSLYDIKNTTGVGVDLSH 73
            :.||.|:.:    ::| .|:.||| ||.:|.  .:|:|||.......|...|.....|..:||.|
Mouse     9 IQNLVPEDK----LSR-CKITVVG-VGNVGMACAISILLKGLADELALVDADTNKLRGEALDLLH 67

  Fly    74 ----INTRASVCPFEGKNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEV 134
                ::|...|.   ||:....|..|  :|:|.||.....|..|.||:..|.::...:.....:.
Mouse    68 GSLFLSTPKIVF---GKDYNVSANSK--LVIITAGARMVSGETRLDLLQRNVAIMKAIVPGIVQN 127

  Fly   135 CPGAMLAFITNPINVIVPIVATILKAKGTYDPNRLFGV-TTLDVVRAQTFVADILNVDPQKVNIP 198
            .|...:..:|||::::..:|   .|..| :...|:.|. ..||..|.:..:.:.|.|:|...:..
Mouse   128 SPDCKIIIVTNPVDILTYVV---WKISG-FPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGW 188

  Fly   199 VIGGHTGRTILPILSQCD---------PPFKGTDKERE---ALIQRIQNAGTEVVNAKDGLGSAT 251
            |:|.| |.:.:||.|..:         .|..|||.::|   .:.:::...|.||:|.|   |..:
Mouse   189 VLGEH-GDSSVPIWSGVNVAGVTLKSLNPAIGTDSDKEHWKNVHKQVVEGGYEVLNMK---GYTS 249

  Fly   252 LSMAFAATQF-------------VSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQG 303
            .::..:.|..             |::|:||..|.|:|.               |.:.|.:||..|
Mouse   250 WAIGLSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEV---------------FLSIPCVLGQSG 299

  Fly   304 VKENTGLPDLDDEERKALNGMLPILKES 331
            :.:...:....:||        .:||:|
Mouse   300 ITDFVKVNMTAEEE--------GLLKKS 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 83/336 (25%)
MDH_euk_gproteo 29..345 CDD:130833 83/335 (25%)
LdhcNP_001355290.1 LDH_1 19..329 CDD:133429 84/339 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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