DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10749 and Ldhb

DIOPT Version :10

Sequence 1:NP_648616.1 Gene:CG10749 / 39470 FlyBaseID:FBgn0036328 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001303251.1 Gene:Ldhb / 16832 MGIID:96763 Length:341 Species:Mus musculus


Alignment Length:347 Identity:79/347 - (22%)
Similarity:138/347 - (39%) Gaps:84/347 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDI--KNTTGVGVDLSHINTRASVCPFEGKNGLKK 91
            |:.||| ||.:|...::.:........|:|.|:  ....|..:||.|           |...|:.
Mouse    23 KITVVG-VGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH-----------GSLFLQT 75

  Fly    92 AMDKAD----------IVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFITNP 146
            ....||          |||:.||:.::.|..|.:||..|.:|...:.....:..|...:..::||
Mouse    76 PKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCTIIVVSNP 140

  Fly   147 INVIVPIVATILKAKGTYDPNRLFGV---------TTLDVVRAQTFVADILNVDPQKVNIPVIGG 202
            ::::            ||...:|.|:         ..||..|.:..:|:.|.:.|...:..::|.
Mouse   141 VDIL------------TYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGE 193

  Fly   203 H--------TGRTILPILSQCDPPFKGTDKERE---ALIQRIQNAGTEVVNAKD------GLGSA 250
            |        :|..:..:..|...|..|||.:.|   .:.:.:.::..||:..|.      ||..|
Mouse   194 HGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVDSAYEVIKLKGYTNWAIGLSVA 258

  Fly   251 TL--SMAFAATQF--VSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQGVKENTGLP 311
            .|  ||....::.  ||:::||:.|           :|::|    |.:.|.||..:|:.......
Mouse   259 DLIESMLKNLSRIHPVSTMVKGMYG-----------IENEV----FLSLPCILNARGLTSVINQK 308

  Fly   312 DLDDEE---RKALNGMLPILKE 330
            ..|||.   ||:.:.:..|.|:
Mouse   309 LKDDEVAQLRKSADTLWDIQKD 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10749NP_648616.1 MDH_glyoxysomal_mitochondrial 28..337 CDD:133422 79/347 (23%)
LdhbNP_001303251.1 LDH_1 20..330 CDD:133429 78/345 (23%)
PTS1 339..341
Blue background indicates that the domain is not in the aligned region.

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