DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and mdh

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_417703.1 Gene:mdh / 947854 ECOCYCID:EG10576 Length:312 Species:Escherichia coli


Alignment Length:311 Identity:143/311 - (45%)
Similarity:202/311 - (64%) Gaps:4/311 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKVAVVGAGGGIGQPLSLLLR-RCPGIDELALHDLSEM-KGIATDLSHISQTGKVIGFTGEKELE 85
            :||||:||.|||||.|:|||: :.|...||:|:|::.: .|:|.|||||....|:.||:|| :..
E. coli     1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DAT 64

  Fly    86 SAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVPAAA 150
            .|:.|||||:::||:.|.|||.|..|...|..:...:...::...|:|.:..||||||..|..||
E. coli    65 PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAA 129

  Fly   151 EVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGHAGITILPLISQCQPIYR 215
            |||...|.:|..:|||:||||::||..|:.:.....|.:|.:||||||:|:|||||:||...:..
E. coli   130 EVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSF 194

  Fly   216 CDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSLLRGIAGQDGLIECAFVASKL 280
            .: ||:.:||.|||.||||||.||||.|||||||..|.|.|..||:|.:.|:.|::|||:|....
E. coli   195 TE-QEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDG 258

  Fly   281 TDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILRQNADEGVNF 331
            ..|.||:.||.|||:|::....:..:|.:|:.|||.:|..|:::...|..|
E. coli   259 QYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEF 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 133/298 (45%)
mdhNP_417703.1 MDH_glyoxysomal_mitochondrial 1..310 CDD:133422 143/311 (46%)

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