DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and MDH2

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_014515.2 Gene:MDH2 / 853994 SGDID:S000005486 Length:377 Species:Saccharomyces cerevisiae


Alignment Length:370 Identity:128/370 - (34%)
Similarity:190/370 - (51%) Gaps:73/370 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TLKVAVVGAGGGIGQPLSLLLR-----------RCPGIDELALHDLSE--MKGIATDLSHISQTG 73
            :||:|::||.|||||.|||||:           |......|||:|:::  :.|:..|||||....
Yeast    13 SLKIAILGAAGGIGQSLSLLLKAQLQYQLKESNRSVTHIHLALYDVNQEAINGVTADLSHIDTPI 77

  Fly    74 KVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNAS--PRAHLA 136
            .|...:....:|:.:..|.:||:.||:||.|||.||.|...|..:..::..:|:...  .:..:.
Yeast    78 SVSSHSPAGGIENCLHNASIVVIPAGVPRKPGMTRDDLFNVNAGIISQLGDSIAECCDLSKVFVL 142

  Fly   137 FITNPVNMIVPA-AAEVLMAH----GTFDSRRLFGITTLDVVRSKKFIGD---------SMNISP 187
            .|:||||.:||. .:.:|..|    .:...||:.|:|.||:||:..|:.:         .:|..|
Yeast   143 VISNPVNSLVPVMVSNILKNHPQSRNSGIERRIMGVTKLDIVRASTFLREINIESGLTPRVNSMP 207

  Fly   188 DDVNIPVIGGHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYA 252
            |   :||||||:|.||:||.||...:.|.:..:::.|.||:|..|.|||.||.||||||||||:|
Yeast   208 D---VPVIGGHSGETIIPLFSQSNFLSRLNEDQLKYLIHRVQYGGDEVVKAKNGKGSATLSMAHA 269

  Fly   253 G----ATFVNSLLRGI--------------------AGQDGLIECAFVASKLTD-APFFASPLEL 292
            |    ..||:.||..|                    .|.|.|:       .|.| |.:||.||.:
Yeast   270 GYKCVVQFVSLLLGNIEQIHGTYYVPLKDANNFPIAPGADQLL-------PLVDGADYFAIPLTI 327

  Fly   293 GKDGIK--RYIPLPQMSDYEKEALEKLLPI----LRQNADEGVNF 331
            ...|:.  .|..:.:|:|.|:   .::|||    |::|.|:|:.|
Yeast   328 TTKGVSYVDYDIVNRMNDMER---NQMLPICVSQLKKNIDKGLEF 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 119/356 (33%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 119/356 (33%)
MDH2NP_014515.2 MDH_euk_gproteo 15..372 CDD:130833 127/368 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344503
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S410
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.750

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