DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and MDH1

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_012838.1 Gene:MDH1 / 853777 SGDID:S000001568 Length:334 Species:Saccharomyces cerevisiae


Alignment Length:330 Identity:154/330 - (46%)
Similarity:209/330 - (63%) Gaps:6/330 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LKSLAKPATWGVVVRTLKVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGIATDLSHISQ 71
            |..:||.|....|....||.|:||||||||||||||:....:.:|.|:||...||:|||||||..
Yeast     2 LSRVAKRAFSSTVANPYKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPT 66

  Fly    72 TGKVIGFTGEKE--LESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAH 134
            ...|.|||.|:.  |.:|:...|:|::.||:||.|||.||.|.|.|.::...:|.|.:.::|.|.
Yeast    67 NSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVRDLAAATAESAPNAA 131

  Fly   135 LAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGHA 199
            :..|:||||..||..|:||...|.::.::|||:||||.:|:.:||.:..|..|....:.|||||:
Yeast   132 ILVISNPVNSTVPIVAQVLKNKGVYNPKKLFGVTTLDSIRAARFISEVENTDPTQERVNVIGGHS 196

  Fly   200 GITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSLLRGI 264
            ||||:|||||.......| .:...|.||||..|.|||.||.|.||||||||:|||.|.|::|.|.
Yeast   197 GITIIPLISQTNHKLMSD-DKRHELIHRIQFGGDEVVKAKNGAGSATLSMAHAGAKFANAVLSGF 260

  Fly   265 AGQDGLIECAFVASKLTDA---PFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILRQNAD 326
            .|:..:||.:||.|.|..:   .|||||:.||.|||::..|:.::|..|:|.|:|....|::|.:
Yeast   261 KGERDVIEPSFVDSPLFKSEGIEFFASPVTLGPDGIEKIHPIGELSSEEEEMLQKCKETLKKNIE 325

  Fly   327 EGVNF 331
            :||||
Yeast   326 KGVNF 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 139/301 (46%)
MDH1NP_012838.1 MDH_glyoxysomal_mitochondrial 18..331 CDD:133422 149/314 (47%)

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