DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and c-NAD-MDH1

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_171936.1 Gene:c-NAD-MDH1 / 839527 AraportID:AT1G04410 Length:332 Species:Arabidopsis thaliana


Alignment Length:348 Identity:76/348 - (21%)
Similarity:136/348 - (39%) Gaps:85/348 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKVAVVGAGGGIGQPLSLLLRR--CPGIDE-LALHDL------SEMKGIATDL---------SHI 69
            ::|.|.||.|.||..|..::.|  ..|.|: :.||.|      ..:.|:..:|         ..:
plant     6 VRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVV 70

  Fly    70 SQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAI-SNASPRA 133
            :.|..|.|.|          |.:|.|:..|.||..||:|..:|:.|.::....|.|: .:|:|..
plant    71 ATTDAVEGCT----------GVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNC 125

  Fly   134 HLAFITNPVN---MIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDV-NIPV 194
            .:..:.||.|   :|:...|.      :...:.:..:|.||..|:...|.:.:::...|| |:.:
plant   126 KVLVVANPANTNALILKEFAP------SIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVII 184

  Fly   195 IGGHAGITILPLISQCQPIYRCDLQ------EIQNLT-----------HRIQEAGTEVVNAKAGK 242
            .|.|:.       ||...:....:|      .::.|.           ..:|:.|..::  ||.|
plant   185 WGNHSS-------SQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAII--KARK 240

  Fly   243 GSATLSMAYAGATFVNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLEL----------GKDGI 297
            .|:.||.|.:....:...:.|..      |..||:..:.....::.|..|          |...|
plant   241 LSSALSAASSACDHIRDWVLGTP------EGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSI 299

  Fly   298 KRYIPLPQMS----DYEKEALEK 316
            .:.:|:.::|    |...|.|::
plant   300 VQGLPIDEVSRKKMDLTAEELKE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 69/335 (21%)
c-NAD-MDH1NP_171936.1 PLN00135 24..332 CDD:177744 68/330 (21%)

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