DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and c-NAD-MDH2

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_199147.1 Gene:c-NAD-MDH2 / 834351 AraportID:AT5G43330 Length:332 Species:Arabidopsis thaliana


Alignment Length:266 Identity:59/266 - (22%)
Similarity:113/266 - (42%) Gaps:35/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKVAVVGAGGGIGQPLSLLLRR--CPGIDE-LALHDL------SEMKGIATDLSHISQTGKVI-G 77
            ::|.|.||.|.||..|..::.|  ..|.|: :.||.|      ..:.|:..:|  :.....:: |
plant     6 VRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMEL--VDAAFPLLKG 68

  Fly    78 FTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAI-SNASPRAHLAFITNP 141
            .....:...|.:|.:|.|:..|.||..||:|..:|:.|.::....|:|: .:|:|...:..:.||
plant    69 VVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANP 133

  Fly   142 VN---MIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGHAGITI 203
            .|   :|:...|.      :...:.:..:|.||..|:...:.:.:::...||...:|.|:...|.
plant   134 ANTNALILKEFAP------SIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQ 192

  Fly   204 LPLISQCQPIYRCDLQEIQNLTHR-----------IQEAGTEVVNAKAGKGSATLSMAYAGATFV 257
            .|.::..........:.::.|...           :|:.|..::  ||.|.|:.||.|.:....:
plant   193 YPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAII--KARKLSSALSAASSACDHI 255

  Fly   258 NSLLRG 263
            ...:.|
plant   256 RDWVVG 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 52/253 (21%)
c-NAD-MDH2NP_199147.1 PLN00135 24..332 CDD:177744 51/248 (21%)

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