DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10748 and MDH

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_190336.1 Gene:MDH / 823906 AraportID:AT3G47520 Length:403 Species:Arabidopsis thaliana


Alignment Length:326 Identity:163/326 - (50%)
Similarity:216/326 - (66%) Gaps:10/326 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGIATDLSHISQTGKVIGFTGEKELESAV 88
            ||||:||.||||||||||::..|.:..|.|:|::.:||:|.||||.:...:|..|||..||...:
plant    84 KVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCL 148

  Fly    89 SGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVPAAAEVL 153
            ...:|||:.||:||.|||.||.|...|.|:...:..|::...|.|.:..|:||||..||.|||||
plant   149 KDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHIISNPVNSTVPIAAEVL 213

  Fly   154 MAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGHAGITILPLISQCQPIYRCDL 218
            ...|.:|.::|||:|||||||:..|:....|:...||::||||||||||||||:|:.:|......
plant   214 KKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAGITILPLLSKTKPSVNFTD 278

  Fly   219 QEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSLLRGIAGQDGLIECAFVASKLTDA 283
            :|||.||.|||.||||||:||||.||||||||||.|.||.|.||.:.|...:.||:||.|.|||.
plant   279 EEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESSLRALDGDGDVYECSFVESTLTDL 343

  Fly   284 PFFASPLELGKDGIKRYI--PLPQMSDYEKEALEKLLPILRQNADEGVNFAKMILSGQSHSPIPA 346
            |||||.:::||:|::..|  .|..:::||::|||.|...|:.:.|:||.||        :.|..|
plant   344 PFFASRVKIGKNGLEAVIESDLQGLTEYEQKALEALKVELKASIDKGVAFA--------NKPAAA 400

  Fly   347 A 347
            |
plant   401 A 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 148/297 (50%)
MDHNP_190336.1 PLN00106 80..389 CDD:215058 155/304 (51%)

Return to query results.
Submit another query.