DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Mdh2

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_112413.2 Gene:Mdh2 / 81829 RGDID:619719 Length:338 Species:Rattus norvegicus


Alignment Length:336 Identity:152/336 - (45%)
Similarity:216/336 - (64%) Gaps:11/336 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LKSLAKPATWGVVVR---------TLKVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGI 62
            |.:||:|.  |..:|         ..||||:||.|||||||||||:..|.:..|.|:|::...|:
  Rat     2 LSALARPV--GAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV 64

  Fly    63 ATDLSHISQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAIS 127
            |.|||||.....|.|:.|.::|...:.|.||||:.||:||.|||.||.|...|..:...:..|.:
  Rat    65 AADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACA 129

  Fly   128 NASPRAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNI 192
            ...|.|.:..|:||||..:|..|||...||.::..::||:||||:||:..|:.:...:.|..||:
  Rat   130 QHCPEAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNV 194

  Fly   193 PVIGGHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFV 257
            ||||||||.||:||||||.|.......::..||.||||||||||.||||.||||||||||||.||
  Rat   195 PVIGGHAGKTIIPLISQCTPKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFV 259

  Fly   258 NSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILR 322
            .||:..:.|::|:|||:||.||.|:..:|::||.|||.|:::.:.:.:::.:|::.:.:.:|.|:
  Rat   260 FSLVDAMNGKEGVIECSFVQSKETECTYFSTPLLLGKKGLEKNLGIGKITPFEEKMIAEAIPELK 324

  Fly   323 QNADEGVNFAK 333
            .:..:|.:|.|
  Rat   325 ASIKKGEDFVK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 135/296 (46%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 134/295 (45%)
Mdh2NP_112413.2 MDH_euk_gproteo 26..335 CDD:130833 145/308 (47%)
MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 144/307 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344420
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.810

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