DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Mdh1b

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:XP_036010132.1 Gene:Mdh1b / 76668 MGIID:1923918 Length:501 Species:Mus musculus


Alignment Length:34 Identity:11/34 - (32%)
Similarity:18/34 - (52%) Gaps:1/34 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IATDLSHISQTGKVIG-FTGEKELESAVSGADVV 94
            :.|||..||.:.|.:. .||:...|..|:..|::
Mouse   429 VLTDLEDISLSEKTLSRLTGDLIQEKLVACGDLL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 11/34 (32%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 11/34 (32%)
Mdh1bXP_036010132.1 NADB_Rossmann 9..459 CDD:419666 10/29 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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