DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and mdh2

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_001011412.1 Gene:mdh2 / 496892 XenbaseID:XB-GENE-971714 Length:338 Species:Xenopus tropicalis


Alignment Length:332 Identity:151/332 - (45%)
Similarity:222/332 - (66%) Gaps:9/332 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAKPATWGVVVRTL--------KVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGIATDL 66
            :|:||:.| ::|.|        :|||:||.|||||||||||:..|.|..|.|:|::...|:|.||
 Frog     5 IARPASHG-LIRGLSTTAQANARVAVLGASGGIGQPLSLLLKNSPLISNLTLYDIAHTPGVAADL 68

  Fly    67 SHISQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASP 131
            |||....||.|:.|.::|..::.||||||:.||:||.|||.||.|...|.::...:..|.:...|
 Frog    69 SHIETRAKVTGYLGAEQLPESLKGADVVVIPAGVPRKPGMTRDDLFTTNASIVATLTEACAKHCP 133

  Fly   132 RAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIG 196
            .|.:..|:||||..:|..:||...||.::...:||:||||:||:..|:.:...:.|..||:||:|
 Frog   134 EAMICIISNPVNSTIPITSEVFKKHGVYNPNHIFGVTTLDIVRANTFVAELKGLDPARVNVPVVG 198

  Fly   197 GHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSLL 261
            ||||.||:|||||..|.......:::.|..|||:||||||.||||.||||||||||||.||.|||
 Frog   199 GHAGKTIIPLISQSTPKVEFPQDQLEALIPRIQDAGTEVVKAKAGAGSATLSMAYAGARFVFSLL 263

  Fly   262 RGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILRQNAD 326
            ..:.|::|:|||:||.|:.|::|:|::||.|||:||::.:.|.:::.:|::.:.:.:..|:.:..
 Frog   264 DAMNGKEGVIECSFVRSEETESPYFSTPLLLGKNGIEKNLGLGKLTAFEEKLVSEAMGELKASIK 328

  Fly   327 EGVNFAK 333
            :|.:|.|
 Frog   329 KGEDFIK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 135/296 (46%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 134/295 (45%)
mdh2NP_001011412.1 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 143/307 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.110

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