DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and mdh1

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_001303830.1 Gene:mdh1 / 448318 XenbaseID:XB-GENE-484872 Length:353 Species:Xenopus tropicalis


Alignment Length:345 Identity:79/345 - (22%)
Similarity:139/345 - (40%) Gaps:55/345 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKVAVVGAGG----------------GIGQPLSLLLRRCPGIDELALHDLSEMKGIATDLSH--I 69
            :||.|.||.|                |..|||.|:|     :|...:  ::.::|:..:|..  :
 Frog     5 VKVLVTGAAGQIAYSLLYGIAKGDVFGKDQPLILVL-----LDITPM--MTVLEGVVMELQDCAL 62

  Fly    70 SQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRA- 133
            ....:||  ..:|| :.|....||.::...|||..||:|..|:.||..:......|::..|.:: 
 Frog    63 PLLKEVI--ATDKE-DVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSV 124

  Fly   134 HLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGH 198
            .:..:.||.|.....|   :.:..:........:|.||..|:|..|...:|::.|||...:|.|:
 Frog   125 KVIVVGNPANTNCLTA---MKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDVKNVIIWGN 186

  Fly   199 AGITILPLISQC------------QPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAY 251
            ...|..|..|..            :.:...|..:.:.:| .:|:.|..|:  ||.|.|:.:|.|.
 Frog   187 HSSTQYPDASHATVNLQGKDVGAFEAVKNDDWLKGEFIT-TVQQRGAAVI--KARKLSSAMSAAK 248

  Fly   252 AGATFVNSLLRGIAGQDGLIECAFVASK-----LTDAPFFASPLELGKDGIKRYIPLPQMSDYEK 311
            |....|..:..|.  .||......|.|.     :.:...::.||.:.....|....|| ::|:.:
 Frog   249 AICDHVRDIWFGT--PDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLP-INDFSR 310

  Fly   312 EALEKLLPILRQNADEGVNF 331
            |.::.....|.:..:..:.|
 Frog   311 EKMDLTAKELHEEKETALEF 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 72/316 (23%)
mdh1NP_001303830.1 MDH_cytoplasmic_cytosolic 3..328 CDD:133421 78/341 (23%)
PTS1 351..353
Blue background indicates that the domain is not in the aligned region.

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