DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and ldhbb

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_001002474.2 Gene:ldhbb / 436747 ZFINID:ZDB-GENE-040718-176 Length:355 Species:Danio rerio


Alignment Length:333 Identity:80/333 - (24%)
Similarity:145/333 - (43%) Gaps:77/333 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDLSE--MKGIATDLSHIS---QTGKVIGFTGEK 82
            ||.|||.|. |:...:|:|||..  .|||||.|:.|  :||...||.|.|   :|.|::  :|:.
Zfish    44 KVTVVGVGQVGMACAVSVLLREL--ADELALVDVVEDKLKGEMMDLQHGSLFLKTPKIV--SGKD 104

  Fly    83 ELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVP 147
              .|..:.:.:|||.||:.:..|..|.:|:..|.|:...:...|...||...|..::|||:::  
Zfish   105 --YSVTANSRIVVVTAGVRQQEGESRLNLVQRNVNIFKHIIPQIVKYSPNCILIVVSNPVDVL-- 165

  Fly   148 AAAEVLMAHGTFDSRRLFGI---------TTLDVVRSKKFIGDSMNISPDDVNIPVIGGHAGITI 203
                      |:.:.:|.|:         |.||..|.:..:.:.:.|.|...|..::|.| |.:.
Zfish   166 ----------TYVTWKLSGLPKHRVIGSGTNLDSARFRYLMAERLGIHPSSFNGWILGEH-GDSS 219

  Fly   204 LPLISQCQPIYRCDLQEIQ------------NLTH-RIQEAGTEVVNAKAGKGSATLSMAYAGAT 255
            :|:.|... :....||::.            ..|| ::.::..||:..| |..:..:.::.|..|
Zfish   220 VPVWSGAN-VAGVSLQKLNPDIGKDTDRENWKETHKKVVDSAYEVIRLK-GYTNWAIGLSVADLT 282

  Fly   256 F-----------VNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDG----IKRYIPLPQ 305
            .           |:::::|:.|             ::|..:.:.|..|...|    :...:.:.:
Zfish   283 ESIMKNLNRVHPVSTMVKGMYG-------------ISDEVYLSLPCVLNSAGVGSVVNMTLTVDE 334

  Fly   306 MSDYEKEA 313
            :|..:|.|
Zfish   335 VSQLKKSA 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 73/320 (23%)
ldhbbNP_001002474.2 LDH_1 55..351 CDD:133429 73/322 (23%)

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