DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Mdh2

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster


Alignment Length:335 Identity:170/335 - (50%)
Similarity:234/335 - (69%) Gaps:11/335 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LKSLAKP-ATWGVVVRTL--------KVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGI 62
            ||.:.|. |..|  |||.        ||.|.||.|||||||||||::.|.:.:|||:|:....|:
  Fly     2 LKQVTKQLALQG--VRTFSVGQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGV 64

  Fly    63 ATDLSHISQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAIS 127
            |.|||||....|..||.|..:|..::.|:||||:.||:||.|||.||.|...|..:...::.:|:
  Fly    65 AADLSHIDTKSKTAGFIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIA 129

  Fly   128 NASPRAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNI 192
            ...|:|.:|.||||||..||.|||:|...|.:|.:||||::||||||::.|||.::.:.|..|.|
  Fly   130 KNCPKALVAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQI 194

  Fly   193 PVIGGHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFV 257
            ||||||:|:||||::||.||:::.:...|:.||.||||||||||.||||.||||||||||||.|.
  Fly   195 PVIGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFA 259

  Fly   258 NSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILR 322
            .|||:|:.|:..:|||::|.|.:|:|.||::||.|||:|::..:.||:::||||:.||..:|.|:
  Fly   260 GSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPELK 324

  Fly   323 QNADEGVNFA 332
            :|..:|::||
  Fly   325 KNIQKGIDFA 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 153/297 (52%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 151/295 (51%)
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 160/308 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454812
Domainoid 1 1.000 185 1.000 Domainoid score I994
eggNOG 1 0.900 - - E1_COG0039
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 311 1.000 Inparanoid score I575
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 1 1.000 - - otm46892
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1106
109.900

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