DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and mdh2

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_998296.1 Gene:mdh2 / 406405 ZFINID:ZDB-GENE-040426-2143 Length:337 Species:Danio rerio


Alignment Length:330 Identity:149/330 - (45%)
Similarity:216/330 - (65%) Gaps:10/330 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAKPATWGVVVRTL--------KVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGIATDL 66
            :|:|.  ..:||:|        ||||:||.|||||||||||:..|.:.||:|.|::...|:|.||
Zfish     5 VARPT--ASLVRSLSTSSQNNAKVAVLGASGGIGQPLSLLLKNSPLVSELSLFDIAHTPGVAADL 67

  Fly    67 SHISQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASP 131
            |||.....|.|:.|..:|..|:.|.:|||:.||:||.|||.||.|...|..:...:....:...|
Zfish    68 SHIETRAHVKGYIGADQLGDALKGCEVVVIPAGVPRKPGMTRDDLFNTNATIVATLVDGCARHCP 132

  Fly   132 RAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIG 196
            :|.:..|:||||..:|..:||:..||.::..::||:||||:||:..|:.:...:.|..||:||:|
Zfish   133 QAMICIISNPVNSTIPITSEVMKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVVG 197

  Fly   197 GHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSLL 261
            |||||||:||||||.|.......::..||.||||||||||.||||.||||||||||||.|..|||
Zfish   198 GHAGITIIPLISQCTPKVEFPADQLSALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFTFSLL 262

  Fly   262 RGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILRQNAD 326
            ..:.|::|::||:||.|:.|:..:|::||.|||:||::.:.|.::|.:|::.:...:..|:.:..
Zfish   263 DAMNGKEGVVECSFVRSEETECKYFSTPLLLGKNGIEKNLGLGKLSAFEEKLVADAMTELKGSIK 327

  Fly   327 EGVNF 331
            :|.:|
Zfish   328 KGEDF 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 134/296 (45%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 134/296 (45%)
mdh2NP_998296.1 PLN00106 6..328 CDD:215058 147/323 (46%)
MDH_glyoxysomal_mitochondrial 25..333 CDD:133422 144/308 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585500
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.810

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