DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and LDHC

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_002292.1 Gene:LDHC / 3948 HGNCID:6544 Length:332 Species:Homo sapiens


Alignment Length:325 Identity:78/325 - (24%)
Similarity:140/325 - (43%) Gaps:61/325 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KVAVVGAGG-GIGQPLSLLLRRCPGIDELALHD--LSEMKGIATDLSHIS---QTGKVIGFTGEK 82
            |:.:||.|. |:...:|:||:..  .|||||.|  |.::||...||.|.|   .|.|:   |..|
Human    22 KITIVGTGAVGMACAISILLKDL--ADELALVDVALDKLKGEMMDLQHGSLFFSTSKI---TSGK 81

  Fly    83 ELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVP 147
            :. |..:.:.:|:|.||..:..|..|..|:..|..:...:..||.:.||...:..::|||:::..
Human    82 DY-SVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVDILTY 145

  Fly   148 AAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGH-------------A 199
            ...::   .|...:|.:.....||..|.:..||:.:.:.|...:..:||.|             |
Human   146 IVWKI---SGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNVA 207

  Fly   200 GI---TILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSLL 261
            |:   |:.|.:..     ..|.:..:|:..::.::..|::..   ||..:.::..:....|.|:|
Human   208 GVALKTLDPKLGT-----DSDKEHWKNIHKQVIQSAYEIIKL---KGYTSWAIGLSVMDLVGSIL 264

  Fly   262 RG----------IAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEK 316
            :.          :.|..|:.|          ..|.:.|..||::|:...:.:...|  |:|||.|
Human   265 KNLRRVHPVSTMVKGLYGIKE----------ELFLSIPCVLGRNGVSDVVKINLNS--EEEALFK 317

  Fly   317  316
            Human   318  317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 73/312 (23%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 73/312 (23%)
LDHCNP_002292.1 LDH_1 18..329 CDD:133429 78/325 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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