DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and LDHB

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:XP_006719137.1 Gene:LDHB / 3945 HGNCID:6541 Length:353 Species:Homo sapiens


Alignment Length:287 Identity:69/287 - (24%)
Similarity:126/287 - (43%) Gaps:53/287 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KSLAKPATWGVVVRTLKVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDLSE--MKGIATDLSHI 69
            |.:|..|.....|...|:.|||.|. |:...:|:|.:..  .|||||.|:.|  :||...||.|.
Human     7 KLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSL--ADELALVDVLEDKLKGEMMDLQHG 69

  Fly    70 S---QTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASP 131
            |   ||.|::   .:|:. |..:.:.:|||.||:.:..|..|.:|:..|.||...:...|...||
Human    70 SLFLQTPKIV---ADKDY-SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSP 130

  Fly   132 RAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGI---------TTLDVVRSKKFIGDSMNISP 187
            ...:..::|||:::            |:.:.:|.|:         ..||..|.:..:.:.:.|.|
Human   131 DCIIIVVSNPVDIL------------TYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHP 183

  Fly   188 DDVNIPVIGGH--------AGITILPL-ISQCQPIYRCD-----LQEIQNLTHRIQEAGTEVVNA 238
            ...:..::|.|        :|:.:..: :.:..|....|     .:|:..:   :.|:..||:..
Human   184 SSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKM---VVESAYEVIKL 245

  Fly   239 KAGKGSATLSMAYAGATFVNSLLRGIA 265
               ||....::..:.|..:.|:|:.::
Human   246 ---KGYTNWAIGLSVADLIESMLKNLS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 59/258 (23%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 59/258 (23%)
LDHBXP_006719137.1 LDH_1 20..279 CDD:133429 65/274 (24%)
L-LDH-NAD 26..279 CDD:273796 64/268 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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