DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Mdh1

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_001285803.1 Gene:Mdh1 / 34414 FlyBaseID:FBgn0262782 Length:337 Species:Drosophila melanogaster


Alignment Length:343 Identity:76/343 - (22%)
Similarity:136/343 - (39%) Gaps:54/343 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKVAVVGAGGGIGQPLSLLLRRCP--GIDE-LALH--DLSEM----KGIATDLSH---------I 69
            ::|.|.||.|.|...|..::.|..  |.|: :.||  |:..|    :|:..:|:.         :
  Fly     5 IRVVVTGAAGQIAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVGVLEGVVMELADCALPLLVEVV 69

  Fly    70 SQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISN-ASPRA 133
            ..|...:||   |::.:|       .:...|||..||:|..|::||..:......|:.. |....
  Fly    70 PTTDPAVGF---KDVSAA-------FLVGAMPRKEGMERKDLLSANVKIFRTQGQALDKFAKKDV 124

  Fly   134 HLAFITNPVNMIVPAAAEVLMAHGTFDSRRLF-GITTLDVVRSKKFIGDSMNISPDDVNIPVIGG 197
            .:..:.||.|    ..|.|..::.....|..| .:|.||..|:...|...:.:....|...:|.|
  Fly   125 KVLVVGNPAN----TNALVCSSYAPSIPRENFSAMTRLDQNRATSQIAAKLGVPISAVKNIIIWG 185

  Fly   198 HAGITILPLISQCQPIYRCDLQEI-----------QNLTHRIQEAGTEVVNAKAGKGSATLSMAY 251
            :...|..|...|.:......::.:           .:....:|:.|..|:.|:  |.|:.:|.|.
  Fly   186 NHSSTQYPDAGQAKVTANGTVKSVVDAINDNGYLQGSFVETVQKRGAAVIAAR--KMSSAMSAAK 248

  Fly   252 AGATFVNSLLRGIA-GQDGLIECAFVASKLTDAP---FFASPLELGKDGIKRYIPLPQMSDYEKE 312
            |....::....|.| ||  .:.....:....|:|   .|:.|:|: |:...:.:....:||:.|.
  Fly   249 AACDHMHDWWNGTAPGQ--FVSMGVFSDGSYDSPKDVIFSFPVEI-KNKQWKIVSGLTLSDFAKT 310

  Fly   313 ALEKLLPILRQNADEGVN 330
            .|......|::..||.::
  Fly   311 KLSVTGKELQEEKDEALS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 70/330 (21%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 70/330 (21%)
Mdh1NP_001285803.1 MDH_cytoplasmic_cytosolic 3..327 CDD:133421 76/340 (22%)
MDH_euk_cyt 6..328 CDD:130819 76/340 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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