DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and ldhba

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_571322.1 Gene:ldhba / 30497 ZFINID:ZDB-GENE-991026-6 Length:334 Species:Danio rerio


Alignment Length:341 Identity:82/341 - (24%)
Similarity:145/341 - (42%) Gaps:79/341 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDLSE--MKGIATDLSHIS---QTGKVIGFTGEK 82
            ||.:||.|. |:...:|:|||..  .|||||.|:.|  :||...||.|.|   :|.|::   .:|
Zfish    23 KVTIVGVGQVGMACAVSVLLREL--ADELALVDVVEDRLKGEMLDLQHGSLFLKTPKIV---ADK 82

  Fly    83 ELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVP 147
            :. |..:.:.:|||.||:.:..|..|.:|:..|.|:...:...|...||...|..::|||:::  
Zfish    83 DY-SVTANSRIVVVTAGVRQQEGESRLNLVQRNVNIFKHIIPQIVKYSPDCILVVVSNPVDVL-- 144

  Fly   148 AAAEVLMAHGTFDSRRLFGI---------TTLDVVRSKKFIGDSMNISPDDVNIPVIGGHAGITI 203
                      |:.:.:|.|:         ..||..|.:..:.:.:.|.....|..::|.| |.|.
Zfish   145 ----------TYVTWKLSGLPKHRVIGSGPNLDSARFRYIMAEKLGIHASSFNGYILGEH-GDTS 198

  Fly   204 LPL----------ISQCQPIYRCDLQEIQNL--THR-IQEAGTEVVNAKAGKGSAT-LSMAYAGA 254
            :|:          :.:..|....| ::.:|.  .|: :.::..||:..|.....|. ||:|....
Zfish   199 VPVWSGANVAGVSLQKLNPDIGTD-KDAENWKEAHKMVVDSAYEVIKLKGYTNWAIGLSVADLTE 262

  Fly   255 TFVNSL---------LRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYE 310
            |.|.:|         ::|:.|             :.:..:.:.|..|...|:...|.: .::|.|
Zfish   263 TLVKNLNRVHPVSTMVKGMYG-------------INEEVYLSLPCVLNSSGVGSVINM-TLTDGE 313

  Fly   311 KEALEKLLPILRQNAD 326
                   :..|:.:||
Zfish   314 -------IGQLKSSAD 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 76/328 (23%)
ldhbaNP_571322.1 LDH_1 19..330 CDD:133429 82/341 (24%)

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