DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and ldha

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_571321.1 Gene:ldha / 30496 ZFINID:ZDB-GENE-991026-5 Length:333 Species:Danio rerio


Alignment Length:335 Identity:83/335 - (24%)
Similarity:146/335 - (43%) Gaps:77/335 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TLKVAVVGAG-GGIGQPLSLLLRRCPGIDELALHDLSE--MKGIATDLSHIS---QTGKVIGFTG 80
            |.||.|||.| .|:...:|:||:..  .|||||.|:.|  :||.|.||.|.|   :|.|::   .
Zfish    21 TNKVTVVGVGMVGMAAAVSILLKDL--TDELALVDVMEDKLKGEAMDLQHGSLFLKTHKIV---A 80

  Fly    81 EKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMI 145
            :|:. |..:.:.||||.||..:..|..|.:|:..|.|:...:...|...||...|..::|||:::
Zfish    81 DKDY-SVTANSKVVVVTAGARQQEGESRLNLVQRNVNIFKFIIPNIIKYSPNCILLVVSNPVDIL 144

  Fly   146 VPAAAEVLMAHGTFDSRRLFGI---------TTLDVVRSKKFIGDSMNISPDDVNIPVIGGH--- 198
                        |:.:.:|.|:         |.||..|.:..:|:.:.|.|...:..|:|.|   
Zfish   145 ------------TYVAWKLSGLPRNRVIGSGTNLDSARFRYLMGEKLGIHPSSCHGWVVGEHGDS 197

  Fly   199 ----------AGITILPLISQCQPIYRC--DLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAY 251
                      ||:::..|    .|....  |.::.:::...:.::..||:..| |..|..:.|:.
Zfish   198 SVPVWSGVNVAGVSLQAL----NPDLGTDKDKEDWKSVHKMVVDSAYEVIKLK-GYTSWAIGMSV 257

  Fly   252 AGATF-----------VNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQ 305
            |....           |::|::|:.|             :.:..|.:.|..||.:|:...:.:..
Zfish   258 ADLCESILKNMHKCHPVSTLVKGMHG-------------VNEEVFLSVPCILGNNGLTDVVHMTL 309

  Fly   306 MSDYEKEALE 315
            ..:.||:.::
Zfish   310 KPEEEKQLVK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 75/320 (23%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 75/320 (23%)
ldhaNP_571321.1 LDH_1 19..330 CDD:133429 83/335 (25%)
L-LDH-NAD 39..325 CDD:273796 75/317 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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