DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Ldha

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:XP_006229294.1 Gene:Ldha / 24533 RGDID:2996 Length:361 Species:Rattus norvegicus


Alignment Length:355 Identity:81/355 - (22%)
Similarity:154/355 - (43%) Gaps:71/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLLTSLKSLAKPATWGVVVRTLKVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDLSE--MKGIA 63
            |::..||....|..        |:.|||.|. |:...:|:|::..  .|||||.|:.|  :||..
  Rat    37 LIVNLLKEEQVPQN--------KITVVGVGAVGMACAISILMKDL--ADELALVDVIEDKLKGEM 91

  Fly    64 TDLSHIS---QTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATA 125
            .||.|.|   :|.|::   ..|:. |..:.:.:|::.||..:..|..|.:|:..|.|:...:...
  Rat    92 MDLQHGSLFLKTPKIV---SSKDY-SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPN 152

  Fly   126 ISNASPRAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGI-TTLDVVRSKKFIGDSMNISP-- 187
            :...||:..|..::|||:::...|.::    ..|...|:.|. ..||..|.:..:|:.:.:.|  
  Rat   153 VVKYSPQCKLLIVSNPVDILTYVAWKI----SGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLS 213

  Fly   188 ---------DDVNIPVIGG--HAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAG 241
                     .|.::||..|  .||:::..|..|...  ..|.::.:::..::.::..||:..|..
  Rat   214 CHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGT--DADKEQWKDVHKQVVDSAYEVIKLKGY 276

  Fly   242 KGSAT-LSMAYAGATF---------VNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDG 296
            ...|. ||:|....:.         ::::::|:.|             :.:..|.:.|..||::|
  Rat   277 TSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG-------------IKEDVFLSVPCILGQNG 328

  Fly   297 IKRYIPLPQMSDYEKEALEKLLPILRQNAD 326
            |...:.:....|.|..        |:::||
  Rat   329 ISDVVKVTLTPDEEAR--------LKKSAD 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 71/320 (22%)
LdhaXP_006229294.1 LDH_1 48..358 CDD:133429 78/344 (23%)

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