DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and mdh-2

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_498457.1 Gene:mdh-2 / 175936 WormBaseID:WBGene00003162 Length:341 Species:Caenorhabditis elegans


Alignment Length:334 Identity:161/334 - (48%)
Similarity:223/334 - (66%) Gaps:6/334 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TSLKSLAKPATWGVVVR----TLKVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSEMKGIATD 65
            |.:::.|......|.||    ..|||::||.|||||||.|||::.|.:..|||:|:....|:|.|
 Worm     7 TLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAAD 71

  Fly    66 LSHISQTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNAS 130
            ||||....||...||.|||.:||..|||:|:.||:||.|||.||.|...|..:...:|..|:.||
 Worm    72 LSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKAS 136

  Fly   131 PRAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVI 195
            |:|.:|.||||||..||.|:|||...|.:|.:|:||:||||||||:.|:.:..........:||:
 Worm   137 PKALIAIITNPVNSTVPIASEVLKKAGVYDPKRVFGVTTLDVVRSQAFVSELKGHDASKTVVPVV 201

  Fly   196 GGHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSL 260
            ||||||||:||:||.:|..:...:||..||.|||:|||||||||||.||||||||.|||.|.|:|
 Worm   202 GGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSATLSMALAGARFANAL 266

  Fly   261 LRGIAGQDGLIECAFVAS-KLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALEKLLPILRQN 324
            :|||.|:.. ::||:||| .:....:|::|:|||.:|:::.:.:.::|.||::.::..:|.|.:|
 Worm   267 VRGIKGEKN-VQCAYVASDAVKGVEYFSTPVELGPNGVEKILGVGKVSAYEQKLIDASVPELNKN 330

  Fly   325 ADEGVNFAK 333
            ..:||.|.|
 Worm   331 IAKGVAFVK 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 146/297 (49%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 145/296 (49%)
mdh-2NP_498457.1 PLN00106 15..333 CDD:215058 155/318 (49%)
MDH_glyoxysomal_mitochondrial 30..338 CDD:133422 154/308 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161744
Domainoid 1 1.000 185 1.000 Domainoid score I2012
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

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