DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Ldhc

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_038608.1 Gene:Ldhc / 16833 MGIID:96764 Length:332 Species:Mus musculus


Alignment Length:343 Identity:87/343 - (25%)
Similarity:148/343 - (43%) Gaps:69/343 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KVAVVGAGG-GIGQPLSLLLRRCPGI-DELAL--HDLSEMKGIATDLSHIS---QTGKVIGFTGE 81
            |:.|||.|. |:...:|:||:   |: |||||  .|.::::|.|.||.|.|   .|.|::  .|:
Mouse    22 KITVVGVGNVGMACAISILLK---GLADELALVDADTNKLRGEALDLLHGSLFLSTPKIV--FGK 81

  Fly    82 KELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIV 146
            ....||  .:.:|::.||...:.|..|..|:..|..:...:...|...||...:..:||||::: 
Mouse    82 DYNVSA--NSKLVIITAGARMVSGETRLDLLQRNVAIMKAIVPGIVQNSPDCKIIIVTNPVDIL- 143

  Fly   147 PAAAEVLMAHGTFDSRRLFGI-TTLDVVRSKKFIGDSMNISPDDVNIPVIGGH------------ 198
               ..|:.....|...|:.|. ..||..|.:..||:.:.::|...:..|:|.|            
Mouse   144 ---TYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVN 205

  Fly   199 -AGITILPLISQCQPIY--RCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMAYAGATFVNSL 260
             ||:|:..|    .|..  ..|.:..:|:..::.|.|.||:|.   ||..:.::..:......|:
Mouse   206 VAGVTLKSL----NPAIGTDSDKEHWKNVHKQVVEGGYEVLNM---KGYTSWAIGLSVTDLARSI 263

  Fly   261 LRG----------IAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYEKEALE 315
            |:.          :.|..|:.|          ..|.:.|..||:.||..::.:...:  |:|.| 
Mouse   264 LKNLKRVHPVTTLVKGFHGIKE----------EVFLSIPCVLGQSGITDFVKVNMTA--EEEGL- 315

  Fly   316 KLLPILRQNADEGVNFAK 333
                 |:::||...|..|
Mouse   316 -----LKKSADTLWNMQK 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 80/327 (24%)
LdhcNP_038608.1 LDH_1 19..329 CDD:133429 87/343 (25%)

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