DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Ldhb

DIOPT Version :10

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_001303251.1 Gene:Ldhb / 16832 MGIID:96763 Length:341 Species:Mus musculus


Alignment Length:368 Identity:81/368 - (22%)
Similarity:149/368 - (40%) Gaps:87/368 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KSLAKPATWGVVVRTLKVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDLSE--MKGIATDLSHI 69
            |.:|..|.....|...|:.|||.|. |:...:|:|.:..  .|||||.|:.|  :||...||.|.
Mouse     7 KLIASVADDEAAVPNNKITVVGVGQVGMACAISILGKSL--ADELALVDVLEDKLKGEMMDLQHG 69

  Fly    70 S---QTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASP 131
            |   ||.|::   .:|:. |..:.:.:|||.||:.:..|..|.:|:..|.||...:...|...||
Mouse    70 SLFLQTPKIV---ADKDY-SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSP 130

  Fly   132 RAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGI---------TTLDVVRSKKFIGDSMNISP 187
            ...:..::|||:::            |:.:.:|.|:         ..||..|.:..:.:.:.|.|
Mouse   131 DCTIIVVSNPVDIL------------TYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHP 183

  Fly   188 DDVNIPVIGGH--------AGITILPL-ISQCQPIYRCD-----LQEIQNLTHRIQEAGTEVVNA 238
            ...:..::|.|        :|:.:..: :.:..|....|     .:|:..:   :.::..||:..
Mouse   184 SSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKM---VVDSAYEVIKL 245

  Fly   239 KAGKGSATLSMAYAGATFVNSLLRGIA----------GQDGLIECAFVASKLTDAPFFASPLELG 293
               ||....::..:.|..:.|:|:.::          |..|          :.:..|.:.|..|.
Mouse   246 ---KGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYG----------IENEVFLSLPCILN 297

  Fly   294 KDGIKRYI-------PLPQMS-------DYEKEALEKLLPILR 322
            ..|:...|       .:.|:.       |.:|:..:. ||:.|
Mouse   298 ARGLTSVINQKLKDDEVAQLRKSADTLWDIQKDLKDLXLPVSR 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 71/339 (21%)
LdhbNP_001303251.1 LDH_1 20..330 CDD:133429 73/343 (21%)
PTS1 339..341 1/2 (50%)

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