DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10748 and Ldha

DIOPT Version :9

Sequence 1:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_001129541.2 Gene:Ldha / 16828 MGIID:96759 Length:361 Species:Mus musculus


Alignment Length:355 Identity:78/355 - (21%)
Similarity:150/355 - (42%) Gaps:71/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLLTSLKSLAKPATWGVVVRTLKVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDLSE--MKGIA 63
            |::..||....|..        |:.|||.|. |:...:|:|::..  .|||||.|:.|  :||..
Mouse    37 LIVNLLKEEQAPQN--------KITVVGVGAVGMACAISILMKDL--ADELALVDVMEDKLKGEM 91

  Fly    64 TDLSHIS---QTGKVIGFTGEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATA 125
            .||.|.|   :|.|::   ..|:. ...:.:.:|::.||..:..|..|.:|:..|.|:...:...
Mouse    92 MDLQHGSLFLKTPKIV---SSKDY-CVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPN 152

  Fly   126 ISNASPRAHLAFITNPVNMIVPAAAEVLMAHGTFDSRRLFGI-TTLDVVRSKKFIGDSMNI---- 185
            |...||...|..::|||:::...|.::    ..|...|:.|. ..||..|.:..:|:.:.:    
Mouse   153 IVKYSPHCKLLIVSNPVDILTYVAWKI----SGFPKNRVIGSGCNLDSARFRYLMGERLGVHALS 213

  Fly   186 -------SPDDVNIPVIGG--HAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAG 241
                   ...|.::||..|  .||:::..|..:...  ..|.::.:.:..::.::..||:..|..
Mouse   214 CHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPELGT--DADKEQWKEVHKQVVDSAYEVIKLKGY 276

  Fly   242 KGSAT-LSMAYAGATF---------VNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDG 296
            ...|. ||:|....:.         ::::::|:.|             :.:..|.:.|..||::|
Mouse   277 TSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYG-------------INEDVFLSVPCILGQNG 328

  Fly   297 IKRYIPLPQMSDYEKEALEKLLPILRQNAD 326
            |...:.:....:.|..        |:::||
Mouse   329 ISDVVKVTLTPEEEAR--------LKKSAD 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 68/320 (21%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 68/320 (21%)
LdhaNP_001129541.2 LDH_1 48..358 CDD:133429 75/344 (22%)
L-LDH-NAD 54..353 CDD:273796 73/330 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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