DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10752 and klhl10a

DIOPT Version :10

Sequence 1:NP_648614.1 Gene:CG10752 / 39467 FlyBaseID:FBgn0036325 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_017207208.2 Gene:klhl10a / 100333629 ZFINID:ZDB-GENE-131015-1 Length:580 Species:Danio rerio


Alignment Length:448 Identity:93/448 - (20%)
Similarity:168/448 - (37%) Gaps:106/448 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 FPRDAMSNECFELAYTWMTNNAIHLPRDKIINLLAAAKCLQCIPLIKRIFEFL--NDYRTHC-EL 163
            ||.  ||::...|.........:.:..|.:..||.||..|....|.:...:||  |....:| .:
Zfish    61 FPE--MSSDTMSLIIQHAYARPVQITEDNVCELLVAADQLLISGLTEACCKFLEANFSLQNCIGI 123

  Fly   164 FSF-----SC---------YLKAKDMGMTQVADMMVSRVTKSFLVLVSNGQFIKMDIDGACTLLR 214
            ::|     ||         |:......:.||::                 :|:::.::....::.
Zfish   124 WAFTERFHSCTELHHKAEFYVLQHFQEVQQVSE-----------------EFLQLPLELLENMIS 171

  Fly   215 SRHLAVQNEIEIFYSALLWLISNYEMRIKYIPRVLSLVRF-LMIPAVFILQWTSNLKDLRPELAN 278
            ...|.|:.|..:|.:.|.|:....|.|..:|..:||.||. ||.|..|:    :|:::....|.|
Zfish   172 RDELNVKQEEVVFEAILRWINHEPENRRNHITALLSRVRLGLMSPEYFM----NNVRNNPLVLEN 232

  Fly   279 VLCHF-LHNAMLSQFEYYTETFQSESIIRGNRRWAQDPQCPYLSLFNANGDSDLSP--------- 333
            ..|.| :.|||...|:.:.|...|..:....|:     :.|...|....|.|..:|         
Zfish   233 EACSFIIINAMKVIFDLHVEPTSSGLVSYMTRQ-----RMPSEVLLAIGGWSIGNPTNGIEAYDT 292

  Fly   334 ------DVFFRYLRQIQNS-PKSFVARLIMKDHMEYEIGDALTVNESWTSENSAEDLKEPGEYNC 391
                  ||      .::|. |:::....:: |...|.:|       .:.|||....::   ::|.
Zfish   293 RANCWKDV------TVENELPRAYHGVAVL-DGFIYAVG-------GFDSENYFSSVR---KFNP 340

  Fly   392 AVGGTSSTEDLDAAPNVKQTFYTSAVELDLDLLAKNHSVFDSDLDSSESSSTTTSIDSFTDCKNG 456
            .   |.:..::  ||..::..|.|...||..|.|.......:.|.::|..:..|:          
Zfish   341 V---THTWHEV--APMYERRCYVSVAVLDGLLYAIGGFNGHARLKTAECYNKNTN---------- 390

  Fly   457 SGTEVNFHAEHPANSNASSFSDSTTCSGGDSETESVQDSNVACTPNLTPESPTEPATN 514
            ..|:::..:|..::::|:|........||.:..|.:          .|.|| ..|.||
Zfish   391 QWTQISPMSERRSDASATSLHGKVYICGGFTGVECL----------FTAES-FNPETN 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10752NP_648614.1 BACK 172..264 CDD:197943 20/92 (22%)
MSCRAMM_ClfA <366..533 CDD:468110 29/149 (19%)
klhl10aXP_017207208.2 PHA03098 23..551 CDD:222983 93/448 (21%)
KELCH repeat 308..351 CDD:276965 9/58 (16%)
KELCH repeat 355..398 CDD:276965 10/52 (19%)
KELCH repeat 402..446 CDD:276965 11/47 (23%)
KELCH repeat 449..492 CDD:276965
KELCH repeat 496..540 CDD:276965
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.