DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14120 and Sid

DIOPT Version :10

Sequence 1:NP_648610.1 Gene:CG14120 / 39463 FlyBaseID:FBgn0036321 Length:1371 Species:Drosophila melanogaster
Sequence 2:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster


Alignment Length:383 Identity:83/383 - (21%)
Similarity:140/383 - (36%) Gaps:109/383 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   628 LPDESGLYTVEEGSSIDLH------CTGALVSPFNRYTALSARCVGDQLYEAEGQLVNIRGFVCQ 686
            |...:|:|.::....:::|      |.|.|    :|.|                       |:|:
  Fly    38 LSQNNGVYDIQRSDIVEIHQTLYLLCNGGL----HRTT-----------------------FLCR 75

  Fly   687 SWPTYAAVRSGQSCAGGTDVV---------------HIGFDVAAGFLSHVELCYDQQE---QISR 733
            ....::...|..:||....||               .:||.....|:.....|:|...   |.|.
  Fly    76 YDSVFSPALSSAACAPPDPVVVKVPDTSCSIPSATFAVGFSFNGRFMELYRNCFDGYSLAFQHSI 140

  Fly   734 YARYELTPANVAYQKGVAQPG-YLRGDFYSGEDVNVLYDQSHQLDAFSTAL--GLDASQ---YFD 792
            |..|.       |...|.:|. ..:.|..||.     :|.:::..|....|  .|.|.|   .||
  Fly   141 YKAYR-------YVNTVPRPNPTWQSDQLSGG-----FDNAYEGRATQACLLTNLGAVQPQCKFD 193

  Fly   793 STKDLYLTRGQLAARLDFVHSSAQRATHFYVNAVPQWRSINIGNWLAVESSLKQFVA---DEAL- 853
                    ||.:.....|:.:..:::|..|:||:||:|.:|.|.|.|||:.:...|.   |..: 
  Fly   194 --------RGHMTPASAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPII 250

  Fly   854 -NVSVHAGSYDISTL-----------PNSQGVQTPLYLNAETKQLPVAKILYRIVIDQESRKGVV 906
             ||.: ..:||:..:           .|:.....|:|| .:..::||.:.:|:||......|.|:
  Fly   251 NNVQI-PRTYDVLKVCIGALGVHRLRHNTNNNMIPIYL-LDNNKIPVPEWMYKIVSHLSGDKWVM 313

  Fly   907 LIVVNNPHITLTETLEDYVICEDV----GAQIDWLDWDKANLQKGYSYACSVEDFIEV 960
            | ..|:..:...:.|..  ||..:    |..::..|       .|::..|....||.:
  Fly   314 L-TYNDVSLPNQQALNQ--ICHVIPCHPGLNLNTKD-------VGHTVCCDPYRFITI 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14120NP_648610.1 NUC 164..416 CDD:238043
NUC 718..967 CDD:469610 64/272 (24%)
NUC 1111..1359 CDD:238043
SidNP_651627.1 Endonuclease_NS 106..358 CDD:460120 65/283 (23%)
Blue background indicates that the domain is not in the aligned region.

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