DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14120 and pnu1

DIOPT Version :10

Sequence 1:NP_648610.1 Gene:CG14120 / 39463 FlyBaseID:FBgn0036321 Length:1371 Species:Drosophila melanogaster
Sequence 2:NP_594598.2 Gene:pnu1 / 2542291 PomBaseID:SPAC17C9.08 Length:322 Species:Schizosaccharomyces pombe


Alignment Length:289 Identity:68/289 - (23%)
Similarity:96/289 - (33%) Gaps:81/289 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1035 INSFS----GPFSGYTFVNSTCWQQQSILAMGSLYQLQDFVCTSWPTYTARRS-GRPCNGGTDLL 1094
            |.||.    |..||.||.:        ....|  ||..| |....|.||...| ||       .|
pombe     6 IKSFGLIAIGAISGVTFTH--------FYYKG--YQGSD-VPDLTPRYTKFDSAGR-------AL 52

  Fly  1095 EVGFQLSSSSSDDFLQ--------TYDVCHDELSEVTRYVHHVLYPGSDQYQRSVSRPSFIPGDF 1151
            |..:..:::.   |.|        ...|.|..:|...|...:..|......|.|:::        
pombe    53 ESIYDFNATK---FFQYGIPGPVADQRVNHGYMSVFDRRTRNPFYTAETITQESLNQ-------- 106

  Fly  1152 YGGKDVNTLYTQVQQNITVSEILGMDASPYFNTTGNVYLARGHLSAKTDFVFG-AAQKASFFFVN 1215
               :..|..|::...:..:.|:.......|   .|:.| .|||.....|..|. .|...:|:..|
pombe   107 ---RKGNRRYSEFVPDDNIPEMFQAKLGDY---RGSGY-DRGHQVPAADCKFSQEAMNETFYLSN 164

  Fly  1216 AAPQ-WQTFNGGNWERIEDSVRKFVADENITVDCYTGTWGVSTLPDVNGIGRELYLDFDENNNGL 1279
            ..|| ...||...|...||..|:.           |..:|..|:  :.|   .|||. .:|..|.
pombe   165 MCPQVGDGFNRNYWAYFEDWCRRL-----------TSKYGSVTI--MTG---PLYLP-KKNERGQ 212

  Fly  1280 -------------IPVPKLYFRVIIDRES 1295
                         :.||..:|:|||..:|
pombe   213 WEVQYRVIGNPPNVAVPTHFFKVIIAEKS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14120NP_648610.1 NUC 164..416 CDD:238043
NUC 718..967 CDD:469610
NUC 1111..1359 CDD:238043 45/200 (23%)
pnu1NP_594598.2 NUC 78..289 CDD:214683 44/196 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.