DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ent3 and ent-4

DIOPT Version :9

Sequence 1:NP_001287052.1 Gene:Ent3 / 39461 FlyBaseID:FBgn0036319 Length:668 Species:Drosophila melanogaster
Sequence 2:NP_001023069.1 Gene:ent-4 / 178339 WormBaseID:WBGene00008123 Length:451 Species:Caenorhabditis elegans


Alignment Length:543 Identity:105/543 - (19%)
Similarity:189/543 - (34%) Gaps:176/543 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GSMDSPEFDNRAPKDQRHSVYLALLAAGIGFVLPYNSFIIAA-----DYWQARFPGRPVALDMSM 95
            |:..|.|.:...|:|:...|:..:|..|||.:||:|.||..|     |||        ..::.:.
 Worm    33 GADSSDEHNELIPEDKGRIVFWIILLNGIGVLLPWNMFITIAPQYYVDYW--------FTVNGTA 89

  Fly    96 TYIFVAFGTVL-----MNNIVLSV--------APFQSRVLFGYMISFTTLIFVAVCEVAWHMF-- 145
            |:...:|.:.:     :.|:::::        .|...|||  ..::|.:|:.|.:  :|..:|  
 Worm    90 THYADSFQSAMGVVAQVPNLIVAIINVLNLIRGPLLYRVL--APLAFNSLLIVII--LALVIFQQ 150

  Fly   146 ----ATNTAYLVNMSAVALTAIGCTVQQSSFYGFASMLPKQYTQAVMAGESIAGFLVSSNRVVTK 206
                |.|..|:|::..|........:.|:||:|.|:..|.:|:.||:.|.:|.|...|...:|..
 Worm   151 PSDQARNWFYIVSLIIVMAMNASNGLYQNSFFGMAADFPAKYSNAVVIGTNICGTFTSVLAIVAT 215

  Fly   207 LLINNDRVSTVIFFLTSTLYILFSYLLHVATIN------SPFVRFHVEACSKIVLRPDEQEIDGV 265
            |..:....:..:.:...:|.|||     |..::      ..|.:::|...:::....::...|..
 Worm   216 LAFSTQAETVALIYFGISLLILF-----VCLVSWWFCKKMDFYKYYVSKGNRLRAAQEQSSFDYR 275

  Fly   266 PSSTRYGVLSMDGTHTTTTSVGPPGTGNTLSFSNPVYELSNPTAGESSIEALGQLPELPATPPAQ 330
            |                                                                
 Worm   276 P---------------------------------------------------------------- 276

  Fly   331 EPTTPTTVAFKVEHVITPRRCRPSKLGDIREGFVTRWRVAQVIYPHMVCIALAYCVTLSLYPGIE 395
                         ::.|.:.|               |.       ..:|:.|.|.|:||::|.: 
 Worm   277 -------------YLETIKYC---------------WL-------QCICVFLVYFVSLSVFPTV- 305

  Fly   396 VEVQSCALRSWMP------------VLLMFCFNTSDVVGKILA---ASPYPWSRRQLILLSGLRI 445
                   |..:.|            :.:...||....||.:.|   ..|.|   |.||:...:|:
 Worm   306 -------LAGFQPGYTVFPNDVYAGIAVFLNFNFFAAVGNVAATFVTFPGP---RLLIVPCVIRL 360

  Fly   446 VLVPLLLLC-CAPRQRP---VISGETAPFVFTIALGITNGLAGSLPMMLAPAKVPGTLKEVTGNI 506
            :.:|..:.. ..|..|.   :.:.|...|.....|..|:|...||.||..|...|....::.|.:
 Worm   361 LFIPFFMFSNYLPHSRTMGVLFTNEWIFFFGNTLLAFTSGYFSSLGMMYTPRVCPPEYSKLAGQV 425

  Fly   507 MTLSYNVGLTVGSLIGYVFESML 529
            ..||..:|:|.|....|...:|:
 Worm   426 SALSLVLGITAGVSFTYAITAMV 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ent3NP_001287052.1 Nucleoside_tran 60..529 CDD:301621 98/517 (19%)
ent-4NP_001023069.1 Nucleoside_tran 60..448 CDD:301621 97/514 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53699
OrthoDB 1 1.010 - - D674800at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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