DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wbp2 and C18B2.4

DIOPT Version :9

Sequence 1:NP_648607.3 Gene:Wbp2 / 39460 FlyBaseID:FBgn0036318 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_508620.1 Gene:C18B2.4 / 180652 WormBaseID:WBGene00015955 Length:296 Species:Caenorhabditis elegans


Alignment Length:330 Identity:119/330 - (36%)
Similarity:162/330 - (49%) Gaps:56/330 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVNTAHA--NNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKKSSD 63
            ||:||:|.  ..|:||:.||.|||::.:|.::|...:.|.||.:|.|.:||||||:||.::...|
 Worm     1 MSLNTSHTPDGQGILIYNGEMILLYTTNVKLKFEKYNVPAFKSTKSGALYLTSHRIIFMNESKKD 65

  Fly    64 SMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNGNYVGEVKFKLHFKAGGAIEYGQALLRSA 128
            ..:||:.||.::.||::|||:...||:||.|:..|.||:.|..:::|.|..||.||:|:||||:|
 Worm    66 EFKSFAMPFNSVRDVKLEQPLLTPNYLKGWVQPMPGGNFDGCPEWRLSFPKGGCIEFGEALLRAA 130

  Fly   129 KTAMNNYHRGGLAGDDPPPY-----QPAGSWNEAPPPAYQPPPG-YYGWLPQHDAF-SGPAPNTV 186
            .  |.:..|...|   ||.|     |.:|:...|.||.|....| |.|:....:.| ..|....|
 Worm   131 D--MASRARPFAA---PPAYGGNMQQQSGTTYYAAPPTYYLVQGTYQGFQAPTNVFPERPPAQNV 190

  Fly   187 YMSDNPPPYPGIAPPAHQPAPQ-QPQAPSSNEPNWYGFSAPPPQQQQQQPGYGPQGWAGGYVQPP 250
            |:.|.|||||||......||.| ||    .....:....|.|  .|.||||           |..
 Worm   191 YVYDMPPPYPGIGQTTPYPAGQFQP----VGTVQYQNVGAYP--GQPQQPG-----------QYH 238

  Fly   251 PYASCAPNCPPQPPY-----AAPAQTYNGPQPYGGYGNVPGGFNTPGFQQPNGNP---NGYPGGP 307
            ||.:   |.|||..:     |||     .|.....|.|:.        ||.:..|   |.|...|
 Worm   239 PYPT---NQPPQGGFNVGQGAAP-----HPSTLPDYNNIQ--------QQSSAQPPAYNAYQEAP 287

  Fly   308 PPPGQ 312
            |.|.:
 Worm   288 PLPSK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wbp2NP_648607.3 PH-GRAM_WBP2 27..129 CDD:275401 45/101 (45%)
C18B2.4NP_508620.1 PH-GRAM_WBP2 29..131 CDD:275401 45/101 (45%)
PAT1 <196..>295 CDD:370676 40/130 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157384
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3294
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H136690
Inparanoid 1 1.050 159 1.000 Inparanoid score I2888
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45819
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002589
OrthoInspector 1 1.000 - - otm14228
orthoMCL 1 0.900 - - OOG6_103038
Panther 1 1.100 - - LDO PTHR31606
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1809
SonicParanoid 1 1.000 - - X3867
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.830

Return to query results.
Submit another query.