DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and xylE

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_418455.1 Gene:xylE / 948529 ECOCYCID:EG11076 Length:491 Species:Escherichia coli


Alignment Length:418 Identity:121/418 - (28%)
Similarity:203/418 - (48%) Gaps:59/418 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 GFLINMIGRKWTM-LFLVLPFILG----WTML----IWAVNVSMLYAS---------RFILGIAG 192
            |:..|..||:.:: :..||.||.|    |..|    |...|...:|.:         |.|.||..
E. coli    76 GYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGV 140

  Fly   193 GAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGV----KIFWLSI--------- 244
            |...:.:|||..|:|...|||.|.||.|..|..|.|.||.|...:    ...||:.         
E. coli   141 GLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFAS 205

  Fly   245 ICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYE--PELAELRETDRETKAN 307
            .| |..|:|..:.:.:||||.:|:|:.:.|.|...::.:.|.....:  .|:....:..|:|...
E. coli   206 EC-IPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGR 269

  Fly   308 KVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIF--LEANTGIEAEWATILIGIMQ 370
            .:.....:        :.|.:.|..|||..|||.|::||..:|  |.|:|.| |...||::|::.
E. coli   270 LLMFGVGV--------IVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDI-ALLQTIIVGVIN 325

  Fly   371 VVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIM 435
            :..|.::.:.|||.||:.|.:...:.|||...::|..|:.|   |..:|:|     .|:..::..
E. coli   326 LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ---APGIVAL-----LSMLFYVAA 382

  Fly   436 FSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGI------GGTFWL 494
            |::.:|||.|:::.|:|...|:|.|.::|..:.||..:.|:.||..::....:      |.::|:
E. coli   383 FAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWI 447

  Fly   495 FAGLTVVGVIFVYFAVPETKGKSLNEIQ 522
            :..:.|:..:|::..|||||||:|.|::
E. coli   448 YGCMGVLAALFMWKFVPETKGKTLEELE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 120/414 (29%)
xylENP_418455.1 xylE 1..485 CDD:182225 121/418 (29%)

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