DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and ATR2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_014006.1 Gene:ATR2 / 855322 SGDID:S000004892 Length:540 Species:Saccharomyces cerevisiae


Alignment Length:574 Identity:108/574 - (18%)
Similarity:196/574 - (34%) Gaps:197/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VKASDNGRTSSTPHDQENLLGNMVHTSTSNNSQKW--PQY---------------VAALAAAGGA 94
            |||.|....|:...:...::.:...|..:|:| .|  |.|               :|.|....|.
Yeast    24 VKAKDKVVVSTEDEEVTTIVSSTKSTQVTNDS-PWQDPTYFSSFGKELMFIATCMLAQLLNQAGQ 87

  Fly    95 FAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTML 159
            ..|..::...|.:            |..:.:..:|:.::..|.|....:..|.|.::.|.|   .
Yeast    88 THALCIMNVLSKS------------FNSEANNQAWLMASFPLAAGSFILISGRLGDIYGLK---K 137

  Fly   160 FLVLPFILGWTMLIWAVNVSMLYASRFILGIA----GGAFCVTAPMYTGEIAQKEIRGTLGSFFQ 220
            .|::.:::   :::|::          |.|::    ..||.:|:..:.|          :|..|.
Yeast   138 MLIVGYVI---VIVWSI----------ISGLSKYSNSDAFFITSRAFQG----------VGIAFI 179

  Fly   221 LMITIGIL-FVYAVGAGVKIFWLSIICGILPL--IFGAIF--FFMPESPTYLVSKDRSENAIKSI 280
            |...:|:: .||.||:..|...:|.|....|.  :||.:|  ..:.|.|.               
Yeast   180 LPNIMGLVGHVYKVGSFRKNIVISFIGACAPTGGMFGGLFGGLIVTEDPN--------------- 229

  Fly   281 QWLRGKEYDYEPELAELRETDRETKANKVNVWAAL--NRPV---------TRKALAISMGLMFFQ 334
            ||   ....|...:|        |..:.:..|.::  |.|.         |..|||| :||:.|.
Yeast   230 QW---PWVFYAFGIA--------TFLSLLMAWYSIPNNVPTNIHGLSMDWTGSALAI-IGLILFN 282

  Fly   335 QVCGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKL---------GRRILL 390
            .|.....::.:.....:          ..::|.::.:||.||......::         .|.:::
Yeast   283 FVWNQAPIVGWDKPYII----------VLLIISVIFLVAFFVYESKYAEVPLLPRAMTKNRHMIM 337

  Fly   391 LASGISMAISTTAIGVYFFLQKQDAAQVVSLGW--------LPVASLCLFIIMFSI-GYGPVPWL 446
            :...:.:...:..|..::::..|...:..|..|        :...|:..|.:.||| ..||. .|
Yeast   338 ILLAVFLGWGSFGIWTFYYVSFQLNLRHYSPVWTGGTYFVFVIFGSMAAFFVAFSIKRLGPA-LL 401

  Fly   447 MMGELFATDIKGFAGSL------AGTSNW--------LLAFVVTKTF----VNLNDG-------- 485
            :...|.|.|    |||:      ...|.|        :|.|.:..:|    :.|:||        
Yeast   402 LCFSLMAFD----AGSIMFSVLPVEQSYWKLNFAMQAILCFGMDLSFPASSIILSDGLPMQYQGM 462

  Fly   486 ----------------LGIGGT-------------------FWLFAGLTVVGVI 504
                            ||:|||                   .:|..||..:||:
Yeast   463 AGSLVNTVINYSASLCLGMGGTVEHQINKSGNDLLKGYRAAVYLGVGLASLGVV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 77/408 (19%)
MFS 118..508 CDD:119392 92/486 (19%)
ATR2NP_014006.1 MFS_Amf1_MDR_like 74..519 CDD:341029 97/523 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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