DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and AMF1

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_015023.1 Gene:AMF1 / 854560 SGDID:S000005905 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:554 Identity:108/554 - (19%)
Similarity:179/554 - (32%) Gaps:201/554 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFL 148
            :|..|.:|.....||  || .|.|...|:....|   ..:..|.||..||.:|......:..|.|
Yeast    45 FVGVLCSAQLMTQAG--LG-QSLAPLHIIGNSFG---TTNAGQLSWFASAYSLTVGTFILIAGRL 103

  Fly   149 INMIGRKWTMLFLVLPFILGWTMLIWAVNVSM-LYASRFILGIA------GGAFCV-TAPMYTGE 205
            .::.|.|   .|.||.|.  |..| |::.... :|:::......      |.||.: .|....|.
Yeast   104 GDIFGHK---KFFVLGFF--WYAL-WSLLAGFSVYSNQIFFDCCRAFQGMGPAFLLPNAIAILGR 162

  Fly   206 IAQKEIRGTL----------GSFFQLMITIGILFVYAVGAGVKIFW-------LSIICGILPLIF 253
            ..:...|..:          |.||     :|.:|...:|   ::.|       :.|.|.:|.:  
Yeast   163 TYKPGRRKNMVFSLFGASAPGGFF-----LGAVFSSMLG---QLAWWPWAYWIMGIACFVLAV-- 217

  Fly   254 GAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNVWAALNRP 318
             |.:|.:|.:|  :.|:|.|.                                     :..|.| 
Yeast   218 -AGYFVIPHTP--MPSRDASS-------------------------------------FKLLER- 241

  Fly   319 VTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATF---VSTLV 380
                       :.|...|.|:..:|.:.    ...|.|....|.|.....:.:|.||   :...:
Yeast   242 -----------IDFAGSVTGVVGLILFN----FAWNQGPVVGWQTPYTYALLIVGTFFLVIFAYI 291

  Fly   381 VDKLGRRIL---LLASGISMAISTTA-----IGVYFFLQKQ------------DAAQ-------- 417
            ..:....:|   .|:|..:..:|..|     .|::.|...|            .:||        
Yeast   292 ESRAAFPLLPFAALSSDTAFVLSCIAAGWASFGIWIFYTWQFMEDSRGQTPLLSSAQFSPVAISG 356

  Fly   418 ---VVSLGWL----PVASLCLF-IIMFSIG-----YGPV---------------PW--------- 445
               .|:.|:|    |.:::.|| :..|::|     ..||               ||         
Yeast   357 FCAAVTTGFLLSHTPPSTVMLFAMTAFTVGTILIATAPVHQTYWAQTFVSIIVMPWGMDMSFPAA 421

  Fly   446 -LMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGT------------------ 491
             :|:.:....:.:|.|.||..|       ||.   .:::.||||.||                  
Yeast   422 TIMLSDSMPHEHQGLAASLVNT-------VVN---YSISIGLGIAGTIESRVNDGGAKPLKGYRC 476

  Fly   492 -FWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQE 524
             :::..||:.:|:.........|..||...|.::
Yeast   477 SWYMGIGLSGLGIFVAATYAWSTFMKSKKRISEK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 83/450 (18%)
MFS 118..508 CDD:119392 93/502 (19%)
AMF1NP_015023.1 MFS_Amf1_MDR_like 48..493 CDD:341029 103/532 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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