DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and GEX2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_013032.1 Gene:GEX2 / 853981 SGDID:S000001814 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:614 Identity:113/614 - (18%)
Similarity:182/614 - (29%) Gaps:244/614 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSNSSGEEANKKSGSNNEESSHLLESAENGAKYGSRQPVKIVKAS--DNGRTSSTPHDQENLLGN 68
            ||:..|..:||||                    |.||..:|::..  .|..|.|.......|..|
Yeast     2 SSSVVGASSNKKS--------------------GIRQSCEIIERERHSNDDTYSMTSTFFKLKEN 46

  Fly    69 MVHTSTSNNSQKWPQYVAALAAAGGAFAAG-----------TVLGWTSPAETE------------ 110
            .: .|...:|.|:     .:.....||..|           |..|:.:.:.:|            
Yeast    47 EI-MSAQFDSLKY-----KILLISTAFVCGFGISLDYTLRSTYTGYATNSYSEHSLLSTVQVINA 105

  Fly   111 IVDRGEGYDFPVDKDQFSWV-------------------GSAMTLGAA------CVCIPIGFLIN 150
            :|..|....:....|.|..:                   .:.:|:.||      |..:....|:.
Yeast   106 VVSVGSQVVYSRLSDHFGRLRLFLVATIFYIMGTIIQSQATRLTMYAAGSVFYNCGYVGTNLLLT 170

  Fly   151 MI-----GRKWTML--------FLVLPFILGWTMLI------WAVNVSMLYASRFILGIAGGAFC 196
            :|     ..||.|.        ::::|:|.|..:..      |:.|::| :|..:.|......|.
Yeast   171 LILSDFSSLKWRMFYQYASYWPYIIIPWISGNIITAANPQKNWSWNIAM-WAFIYPLSTLPIIFL 234

  Fly   197 VTAPMYTG----------EIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIFWLSIICGILPL 251
            :....|..          |.|:||..|  |.|..|               |.:||...|.|||.:
Yeast   235 ILYMKYKSSKTAEWRSLKEQARKERTG--GLFENL---------------VFLFWKLDIVGILLI 282

  Fly   252 IFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNVWAALN 316
            ........:|                                |....||.::...:|:       
Yeast   283 TVSLGCILVP--------------------------------LTLANETSQKWHNSKI------- 308

  Fly   317 RPVTRKALAISMGLMFFQQVCGINAVIFYASRIF---------LEANTGIEAEWATILIGIMQVV 372
                 .|..:|.|.:||        :..|....|         |.::.||   ||.:.:......
Yeast   309 -----IATLVSGGCLFF--------IFLYWEAKFAKSPLLPFKLLSDRGI---WAPLGVTFFNFF 357

  Fly   373 ATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFI---- 433
            ..|:|   .|.|...:|     :||..|:|:           ||::|:|.....|:...|.    
Yeast   358 TFFIS---CDYLYPVLL-----VSMKESSTS-----------AARIVNLPDFVAATASPFYSLLV 403

  Fly   434 -----IMFSIGYGPVPWLMMGELF---------------ATDIKGFAGSLAGTSNWLLAFVVTK- 477
                 :..|:..|...|::...||               |:.|.|.:|.|...|..::...:|. 
Yeast   404 AKTRKLKLSVIGGCAAWMVCMGLFYKYRGGSGSHEGVIAASVIMGLSGLLCSNSVIVILQAMTTH 468

  Fly   478 -----------TFVNLNDGLG--IGGTFW 493
                       ||..|...:|  :.|..|
Yeast   469 SRMAVITGIQYTFSKLGAAIGASVSGAIW 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 79/443 (18%)
MFS 118..508 CDD:119392 86/477 (18%)
GEX2NP_013032.1 MFS_ARN_like 59..571 CDD:340880 94/531 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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