DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and VBA5

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_013031.3 Gene:VBA5 / 853980 SGDID:S000001813 Length:582 Species:Saccharomyces cerevisiae


Alignment Length:645 Identity:127/645 - (19%)
Similarity:206/645 - (31%) Gaps:260/645 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KYGSRQPVKIVKASD---NGRTSSTPHDQENLLGNMVHTSTSNNSQKWPQYVAALAAAGGAFAAG 98
            ||.|:|.::....||   |.|.|:     ::.:|..::...:  |.....::.||    .....|
Yeast     5 KYSSQQEIEGACGSDASLNARGSN-----DSPMGLSLYLCLA--SLTLVLFITAL----DILIVG 58

  Fly    99 TVL-------------GWTSPAETEIVDRGEGYDFPVDKDQFSW------VGSAMTLGAACVCIP 144
            |::             ||..          .||..|.......|      :|...:|..|.:...
Yeast    59 TIIDVVAEQFGNYSKTGWLV----------TGYSLPNAILSLIWGRFASIIGFQHSLILAILIFE 113

  Fly   145 IGFLINMIGRKWTMLFL-------------VLPFILGWTM-------LIWAVNVSMLYASRFILG 189
            .|.||..:.....||..             .|.|::|.||       |:.:: :|..:|...|:|
Yeast   114 AGSLIAALASSMNMLIFGRVVAGVGGSGLQTLCFVIGCTMVGERSRPLVISI-LSCAFAVAAIVG 177

  Fly   190 -IAGGAF--------C--VTAPM-----------YTGE---IAQ--KEIRGTLGSF----FQLMI 223
             |.||||        |  :..|:           |..|   |.|  |:..||:.||    |:..:
Yeast   178 PIIGGAFTTHVTWRWCFYINLPIGGLAIIMFLLTYKAENKGILQQIKDAIGTISSFTFSKFRHQV 242

  Fly   224 TI-----GILFVY------AVGAGVKIF------------WLS------IICGILPLIFGAIFFF 259
            ..     ||:|.:      ...||:.:|            |.|      ::.|:|..||..::.|
Yeast   243 NFKRLMNGIIFKFDFFGFALCSAGLVLFLLGLTFGGNKYSWNSGQVITYLVLGVLLFIFSLVYDF 307

  Fly   260 MPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNVWAALNRPVTRKAL 324
                  :|..|                 ::.||:....|.             ..|.|.|.:.|:
Yeast   308 ------FLFDK-----------------FNPEPDNISYRP-------------LLLRRLVAKPAI 336

  Fly   325 AISMGLMFFQQVCGINAVIFYASRIF--LEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGR- 386
            .| :.::.|....|.|..:.|:.:.|  :.|::..:|....|.|.|..|:|...|.::..|||. 
Yeast   337 II-VNMVTFLLCTGYNGQMIYSVQFFQLIFASSAWKAGLHLIPIVITNVIAAIASGVITKKLGLV 400

  Fly   387 RILLLASGI-------------SMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSI 438
            :.||:..|:             :.:..:|.|||                        |.:..||:
Yeast   401 KPLLIFGGVLGVIGAGLMTLMTNTSTKSTQIGV------------------------LLLPGFSL 441

  Fly   439 GYGPVPWLMMGEL------------------FATDIKGFAGSLAGTSNWLLAFVVTKTFVN---- 481
            |:.....||..:|                  |.|.:|....:|.|.   |...|.:.:|.|    
Yeast   442 GFALQASLMSAQLQITKDRPEAAMDFIEVTAFNTFMKSLGTTLGGV---LSTTVFSASFHNKVSR 503

  Fly   482 --------------------------------LNDGLGIGGTFWLFAGLTVVGVIFVYFA 509
                                            |:|  .|...||:..|...:|.:|..|:
Yeast   504 AHLEPYEGKTVDDMILYRLQNYDGSHSTIGNILSD--SIKNVFWMDLGFYALGFLFCSFS 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 98/476 (21%)
MFS 118..508 CDD:119392 108/545 (20%)
VBA5NP_013031.3 MFS_Azr1_MDR_like 43..493 CDD:341045 104/528 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.